| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2166 |
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| Symbol | |
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| ID | 6120137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2274897 |
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| End bp | 2275904 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641650104 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001776649 |
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| Protein GI | 170731216 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type
[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAAA CAATTACGGT GATCCGCGGT GATGGTATTG GCCCGGAAAT CATGGATGCC
ACCCTGTCGG TATTAAACGC GTTACAAGCG AATCTGAATT ACGAATTCGC AGATGCAGGC
TTGAGCGCAC TTGAAAAACA CGGAGACTTG CTACCGGAAG CCACCCTAAA TTCAATCAGC
AAGAACAAAA TCGCGCTAAA AAGCCCGCTC ACAACCCCGG TAGGTGAAGG TTTCAGCTCG
ATCAATGTCG CCCTGCGACG TAAATTCGAC TTATACGCCA ACGTTCGCCC CGCAAAATCT
TTCCCAAATA CCAAGTCACG CTTTAGCGAT AACGTAGACC TGATCACCGT ACGGGAAAAT
ACCGAGGGTG CCTACCTGAG CGAGGGTCAA ACCATCTCTC CTGACGGAGA AGTTGCCACT
TCAAGCGCAC GAGTGACCCG TAAAGGGTCG GAACGCATCG TCCGTTACGC ATTCGACTTA
GCCCGAACAA CGGGCCGCAA AAAGGTCACC GCAGTACACA AAGCCAACAT CATTAAATCA
ACCTCTGGAC TATTTCTGAA AACCGCCCGA GACGTCGCAA GCCAGTACCC AGAAATCGAT
TTCCAAGAAA TGATCGTCGA CAACACTTGC ATGCAACTTG TGATGCGCCC AGAACAATTC
GACATCATTG TCACCACAAA CTTGTTCGGT GACATCCTCT CAGATTTGTG CGCAGGCTTG
GTCGGCGGTT TAGGCTTGGC TCCGGGCGCC AACATTGGTA ATGAACAAGC CATCTTCGAA
GCCGTACATG GCTCGGCTCC AGACATCGCT GGACAAGGTA AAGCCAATCC ATGCGCGCTG
CTGCTAGGTG CTGTACAAAT GCTGGATCAT ATCGGTCAAC CACAAAACGC CGAACGCCTA
CGCAACGCAA TCGTGGCCAC ACTGAATGCC AAAGACTCGC TGACTCCCGA TCTGGGGGGT
AACGGCAACA CCATGGGATT CGCCAAGGCA ATTGCCAGCA GACTCTAA
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| Protein sequence | MTQTITVIRG DGIGPEIMDA TLSVLNALQA NLNYEFADAG LSALEKHGDL LPEATLNSIS
KNKIALKSPL TTPVGEGFSS INVALRRKFD LYANVRPAKS FPNTKSRFSD NVDLITVREN
TEGAYLSEGQ TISPDGEVAT SSARVTRKGS ERIVRYAFDL ARTTGRKKVT AVHKANIIKS
TSGLFLKTAR DVASQYPEID FQEMIVDNTC MQLVMRPEQF DIIVTTNLFG DILSDLCAGL
VGGLGLAPGA NIGNEQAIFE AVHGSAPDIA GQGKANPCAL LLGAVQMLDH IGQPQNAERL
RNAIVATLNA KDSLTPDLGG NGNTMGFAKA IASRL
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