Gene Xfasm12_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2158 
Symbol 
ID6120129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2264738 
End bp2265490 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content52% 
IMG OID641650097 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_001776642 
Protein GI170731209 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACTT TGATTATTTC AGATCTGCAT TTGGATCCGT TGCGTCCCGT GGTGACTGAA 
TTATTTCTGC GATTCTTGCG GGAACAGGTG TCTGGTGCCG ATGCGCTTTA TATTCTTGGC
GACCTGTTTG AAGTATGGAT TGGTGACGAT ATGCCTTCAG AAGTCGCCGA CATGGTGGCG
GCTGCGTTGC GTACCTACGC CGATGCGGGT ACGCCGCTGT ACTTCATGCC AGGTAACCGT
GATTTTCTGG TGGGTGCCGA TTATGCAGCG CGTGCTGGTT TCCGGATTCT TCCGGATCCA
TGTGTCGTTG ATCTCTATGG GGAACCCACG CTGCTGTTAC ACGGTGACCT GTTATGTACA
GACGATATCG CGTATCAAGC GTTCCGTGCA CAGACGCGTG ACCCGGAATT CATTGCGCAG
TTTTTGACGC AGACGCTTTC CGCGCGTCTT GCTTTTTCAC AGCAGGCGCG TCTGGCCAGT
CACGCGCACC AGTCTGGATT GAAACAGGAA AATGATTCCA CGCAGTTTGA AAAAATTACT
GACGTAGTGC CTGCTGATGT TGCAGCGATG TTTGCTTGCT ACGGGGTCAA TCGAATGATT
CATGGCCATA CGCATCGTCC AGCGTTGCAC ATGTTGCAGG TGGCTGAGTG TGCGTGCACG
CGTGTAGTGC TTGGTGATTG GTATCAGCAA GGGTCAGTGT TGTGTGTGGA TGCTGATGGT
CTTGTGTTGG AGCAGTTGTT ATTGCCAGGT TGA
 
Protein sequence
MTTLIISDLH LDPLRPVVTE LFLRFLREQV SGADALYILG DLFEVWIGDD MPSEVADMVA 
AALRTYADAG TPLYFMPGNR DFLVGADYAA RAGFRILPDP CVVDLYGEPT LLLHGDLLCT
DDIAYQAFRA QTRDPEFIAQ FLTQTLSARL AFSQQARLAS HAHQSGLKQE NDSTQFEKIT
DVVPADVAAM FACYGVNRMI HGHTHRPALH MLQVAECACT RVVLGDWYQQ GSVLCVDADG
LVLEQLLLPG