Gene Xfasm12_2149 details

Gene Information

• Locus tag: Xfasm12_2149
• ID: 6120119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 2254929
• End bp: 2255507
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641650089
• Product: response regulator receiver protein
• Protein accession: YP_001776635
• Protein GI: 170731202
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0520959
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCACT CCGCCGCCAA GATCGGCTTG CTAGTCGACG ACGACACACT CTATCTGCGC 
ACCCTACAGC GCAGTTTGGG ACGCCGTGGC GTAGACACCG TGACCGCCAC CGATGCAGTC 
AGCGCATTAA CTGCTGCGCG TAGCGCGCTT CCAAGTTTCG CCTTGCTCGA CCTAAAGCTC 
GGCCAAGATT CGGGGTTAGC GCTCATCCAA GAACTGCGCG CCATCCGCAG CGATATGCGA 
ATCCTGCTCG TCACCGGCTA CGCCAGCATT GCCACTGCGG TAGAAGCCAT TAAACGCGGT 
GCCGACGAAT ATCTACCCAA ACCAGCCAAC ATCAACACCA TCCTGCGTGC AATCAGCGAA 
GAGACAGCAA ACGGATTAAC GCCGGACAAG GACGAATCTG CTTTACATAC GATGACTCCG 
CTCAGTCGCC TTCAGTGGGA ACATATCCAA CAAGCATTAC ACGAGACGGA CGGCAACATC 
TCCGCCGCCG CACGGTTACT TGGCATGCAT CGGCGCTCTC TGCAGCGCAA GCTAACCAAG 
CGCCCCAGCC CTGGAACGCT GCACGATTCA GATCATTAA 

 

Protein sequence

MNHSAAKIGL LVDDDTLYLR TLQRSLGRRG VDTVTATDAV SALTAARSAL PSFALLDLKL 
GQDSGLALIQ ELRAIRSDMR ILLVTGYASI ATAVEAIKRG ADEYLPKPAN INTILRAISE 
ETANGLTPDK DESALHTMTP LSRLQWEHIQ QALHETDGNI SAAARLLGMH RRSLQRKLTK 
RPSPGTLHDS DH