| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2147 |
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| Symbol | ispG |
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| ID | 6120117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2252240 |
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| End bp | 2253511 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641650087 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001776633 |
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| Protein GI | 170731200 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.742061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATATGC ACGACATCGT GACTCCTCAA GTTGCTTCTG ATTCCGCCGT ACCTTGGTCG
CGGCGCCGTA CGCAGGCAGT CAATATTGGT CACGTGACCG TTGGAGGGGG ACACCCAGTA
GTGGTGCAGT CGATGACCAA CACGGATACA GCCGACGTTG TTGCTAGTAC CAAGCAGGTT
GCCGAATTGT GGCGTGCCGG TTCTGAGATG GTGAGGTTGA CCGTCAACAA TGCCCAATCG
GCTGCTGCAA TCCCGCGTAT TGCCGAACGC TTGGCAATGA TGGGCATTGA AGTCCCTTTG
ATCGGTGATT TTCATTACAA CGGTCATCAA TTATTGGCTG ACGAACCGGC GTGTGCGGAA
GTGCTGGCCA AGTACCGGAT CAATCCTGGT AATGTCGGTT TTGGAAAGAA GCGGGATTTG
CAGTTCGGCC AATTGATTGA ATGCGCGATC CGCTATGGCA AACCCATTAG GATTGGCGCC
AATTGGGGAT CATTGGATCA GATGTTGGCG GCGCAATTGA TGGATGAGAA CAATCGGCGC
AAGCAGCCAT GGGATGCCGC TCAGGTGTTG CGTGAGGTAT TGATTTGTTC GGCGGTAGGC
TCTGCCGAGC GCGCTGTTGA GTTGGGGTTG CCGCGTGATC GTATTGTGCT CTCGGCCAAG
GTGTCTGGTG TGCAGGAGCT GATTGCGGTA TACCGTGATA TGGCAGCGCG CTGTGACTTT
GCCTTGCATC TTGGTCTCAC TGAGGCTGGT ATTGGGAGTA AAGGGATCGT TGCGTCCTCA
GCGGCGCTGG CAGTATTACT GCAAGAAGGG ATCGGAGATA CGATCCGCAT TTCGTTGACC
CCTGAGCCGG GGCAATCGCG TACCCAAGAG GTGATTGTGG CCCAGGAGTT GTTGCAGACA
ACTGGTCATC GTGCCTTTAC TCCGATGGTC ACTGCCTGCC CGGGGTGTGG GCGTACCACT
TCGGAATTCT TCCAGGAACT CGCCAAGACG GTGCAGCAGC ACGTGCGCGA CAAGATGCAG
GTGTGGAAAA TAACTCACCC TGGTGCGGAA ACTATGACCT TGGCCGTCAT GGGTTGTGTG
GTGAACGGGC CGGGGGAATC GCGTCACGCC AACATTGGTA TTTCGCTGCC TGGCACGGGA
GAGATGCCGG TTGCGCCGGT GTTTATTGAT GGTGAGAAGT CGGTGACCTT GCGTGGCGGA
AACATTGCCC AGGACTTCAT CACTTTAGTT GACGATTACG TAGAACGCAG GTATGCCCGT
TTCCCCGACT GA
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| Protein sequence | MHMHDIVTPQ VASDSAVPWS RRRTQAVNIG HVTVGGGHPV VVQSMTNTDT ADVVASTKQV
AELWRAGSEM VRLTVNNAQS AAAIPRIAER LAMMGIEVPL IGDFHYNGHQ LLADEPACAE
VLAKYRINPG NVGFGKKRDL QFGQLIECAI RYGKPIRIGA NWGSLDQMLA AQLMDENNRR
KQPWDAAQVL REVLICSAVG SAERAVELGL PRDRIVLSAK VSGVQELIAV YRDMAARCDF
ALHLGLTEAG IGSKGIVASS AALAVLLQEG IGDTIRISLT PEPGQSRTQE VIVAQELLQT
TGHRAFTPMV TACPGCGRTT SEFFQELAKT VQQHVRDKMQ VWKITHPGAE TMTLAVMGCV
VNGPGESRHA NIGISLPGTG EMPVAPVFID GEKSVTLRGG NIAQDFITLV DDYVERRYAR
FPD
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