Gene Xfasm12_2117 details

Gene Information

• Locus tag: Xfasm12_2117
• Symbol: sucC
• ID: 6120088
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 2219461
• End bp: 2220624
• Gene Length: 1164 bp
• Protein Length: 387 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641650060
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_001776606
• Protein GI: 170731173
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTTCC ACGAATACCA GGCAAAACAA CTATTTGCCG AATACGGCAT CCCTGTTCCG 
GCCGGACGCA TCGCGTCTTC AGCCGATGAA GCGGTCACAG CCGCCAAATC CTTGGGCAAC 
GGCCCCTGGA TGGTAAAAGC TCAGATTCAT GCGGGCGGTC GCGGTAAGGC CGGCGGCGTG 
AAATTCTGCA AGACAACCGA CGAAGTGAAA CAGGCCGCAG CAACAATGCT CGGTACCAAG 
ATGGCTACTT ACCAGTCAGC AGGTGTCGCT CTGCCGGTGA ATCTGGTCCT GGTCACCGAA 
GCCGGTGAAA TCACTAAAGA ACTCTATCTG TCAGTGTTAG TGGATCGCGG CACGCGTTCA 
ATCACCTACA TCGCCTCATC CGAGGGCGGC GTGGACATTG AGCACGTTGC AGCTGAAACC 
CCTGAAAAAA TCCAAACGCT CAACGTCGAC TTTGTCGAAG GCCTACAGCC ATACCAAGGA 
CGCGATATTG GATTTCACCT CGGCTTAGAA GCAAAACAGG TTAATCAGCT GTCCAAAATC 
ATGATTAGCC TCTATCAATT GTTCAACGAC AAAGATTTGT CCTTGATCGA ATTAAATCCA 
TTAGCAATCC TGAGCAATGG GGATTTGTAC GCACTGGATG GAAAAATTAA TTCCGACGAC 
AACGCCACAT TCCGCCATAA AGAATTGGCC GCAATGCGCG ATAAAACTCA GGAAGACGAA 
ACCGAGGTTC TAGCTTCAGA AAACGATCTG AACTACGTCA CCATGGATGG CAACATCGGC 
TGCATGGTCA ATGGAGCCGG ACTTGCCATG GCCACGATGG ATGTGATCAA ACTCAATGGC 
GGCGAACCGG CAAACTTCCT TGATGTCGGC GGCGGCGCTA CCAAAGAGCG CGTGACGACC 
GCATTCAAAC TGATCCTTTC CTCAAACAAG GTCAAAGCCA TCTTTGTCAA TATCTTCGGT 
GGCATTGTCC GCTGCGACAT GATTGCCGAA GGCATCATCG CTGCAGTGAA GGAAGTGGGT 
GTCAAAGTGC CTGTTATCGT ACGCTTGGAA GGCACCAATG TAGACGCTGG CAAACAACTG 
CTAGCCACAT CCGGCCTCGC CATCATCCCG GCTGACGACA TCAACGATGG CGCCAAAAAA 
GCCGTGGCCG CTGTCACCGC CTGA 

 

Protein sequence

MNFHEYQAKQ LFAEYGIPVP AGRIASSADE AVTAAKSLGN GPWMVKAQIH AGGRGKAGGV 
KFCKTTDEVK QAAATMLGTK MATYQSAGVA LPVNLVLVTE AGEITKELYL SVLVDRGTRS 
ITYIASSEGG VDIEHVAAET PEKIQTLNVD FVEGLQPYQG RDIGFHLGLE AKQVNQLSKI 
MISLYQLFND KDLSLIELNP LAILSNGDLY ALDGKINSDD NATFRHKELA AMRDKTQEDE 
TEVLASENDL NYVTMDGNIG CMVNGAGLAM ATMDVIKLNG GEPANFLDVG GGATKERVTT 
AFKLILSSNK VKAIFVNIFG GIVRCDMIAE GIIAAVKEVG VKVPVIVRLE GTNVDAGKQL 
LATSGLAIIP ADDINDGAKK AVAAVTA