| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2114 |
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| Symbol | |
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| ID | 6120085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2214170 |
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| End bp | 2215903 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641650057 |
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| Product | pilus biogenesis protein |
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| Protein accession | YP_001776603 |
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| Protein GI | 170731170 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAC CTCATTCAGC CAATCTTGTC GGCATCACCG GTATTGCCCG TCGCCTGGTC
CAGGATGGCA GCATTGAGGA AGCCACTGCA CGCACTGCTC AAAATCAGGC AATGGCCGCA
AAAGTGCCTT TACCACAGTG GTTGATCGAT AAAAAACTAG TGAGTGCAGC AAAATTGGCC
GCGGCCAATG CACTTGAGTT CGGGATGCCG CTGCTGGATG TGTCCGCATT CGACCACAAT
CACAATGCAA TGAACTTGGT CGACGAAGAA TTACTGCAAA AGCATCGGGT GTTGCCATTA
TTTAAACGCG GTAATCGACT GTTCGTCGGG ATCAGCAATC CAACCCAAAC ACAGGCCCTG
GACGACATCA AATTCCACAC CAATCTGGTC GTGGAACCGA TTCTGGTCGA CGAAGACCAG
ATACGACGCA CACTTGAACA ATGGCAATCT AGGAGCGGCG CGCTCAGCTC CGCATTGGAG
GAAGAGGATA ACGGCATTGA AGGGCTGGAT ATCGGCGGCG GAGACGACGA CGGGGCCAGT
GGCGATACAG GGATTGATGC CAAGAGCGAT GACACACCTG TCGTCAAATT CATCAACAAA
GTGCTGATTG ATGCCATCCG ACGCGGCGCA TCAGACATCC ACTTTGAACC ATACGAAGAA
GATTACCGCG TCCGTTTCCG GATTGATGGT CTGCTGAAGG CTGTGGCAAA AGCACCGAAC
AAGTTGAATC AGCGTATCGC CGCACGCTTG AAAGTCATGT CGCAACTGGA TATCGCGGAA
AAACGCGTCC CTCAAGACGG ACGTATCAAG CTTAATCTGT CGAAAACCAA GCAAGTCGAT
TTCCGCGTCA GCACCTTGCC AACGCTGTTC GGCGAGAAAG TGGTACTGCG TATCTTGGAT
GGCAGCGCGG CAAAGCTGGG TATCGACAAA CTCGGTTACG AAGCTGACCA ACAAACGCTT
TTTATGGAAG CAATCCACAA ACCCTATGGA ATGGTACTGG TCACTGGTCC GACCGGTTCG
GGCAAGACCG TGTCACTGTA CACTGCACTA GGCATCCTCA ATGACGAAAC ACGCAATATC
TCCACAGCCG AAGATCCTGT AGAAATCCGG CTGCAGGGTG TCAATCAGGT ACAACAAAAC
AACAAGCGCG GTATGACGTT TGCCGCAGCA TTACGTTCGT TTCTGCGCCA AGACCCGGAT
GTGATCATGG TCGGCGAAAT CCGGGATCTG GAAACCGCTG AAATCGCCAT CAAAGCCGCA
CAGACCGGCC ACATGGTGCT CTCCACACTA CATACCAACG ATGCACCGCA AACCATCGCA
CGCCTCATGA ACATGGGGAT TGCACCATAC AACATCACTT CATCCGTGAC CTTAGTGATT
GCACAGCGAT TGGCACGGAG ATTGTGCAAC AAGTGCAAGC GCCCGGTTCA ATTGCCGAAA
AACGCATTAC TGGCCGAAGG ATTCACTCAA GAACAAATTG ATGCGGGGCT GGAATTATAC
GAGCCTGTCG GTTGCGACGA ATGCACCGAA GGCTACAAAG GCCGCACAGG TATTTATCAA
GTGATGCCAA TTACCGAAGG GATTTCCTCG ATCATTTTAG CCGGCGGTAA TGCCTTACAA
ATCGCCGAAG AGGCACAGCG CATCGGCATC AACGACCTAC GCCAATCGGC GCTACTCAAA
GTCGCTCAGG GCATCACCGG GCTGGCTGAA ATTAATCGAG TCACCAAAGA TTAG
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| Protein sequence | MNTPHSANLV GITGIARRLV QDGSIEEATA RTAQNQAMAA KVPLPQWLID KKLVSAAKLA
AANALEFGMP LLDVSAFDHN HNAMNLVDEE LLQKHRVLPL FKRGNRLFVG ISNPTQTQAL
DDIKFHTNLV VEPILVDEDQ IRRTLEQWQS RSGALSSALE EEDNGIEGLD IGGGDDDGAS
GDTGIDAKSD DTPVVKFINK VLIDAIRRGA SDIHFEPYEE DYRVRFRIDG LLKAVAKAPN
KLNQRIAARL KVMSQLDIAE KRVPQDGRIK LNLSKTKQVD FRVSTLPTLF GEKVVLRILD
GSAAKLGIDK LGYEADQQTL FMEAIHKPYG MVLVTGPTGS GKTVSLYTAL GILNDETRNI
STAEDPVEIR LQGVNQVQQN NKRGMTFAAA LRSFLRQDPD VIMVGEIRDL ETAEIAIKAA
QTGHMVLSTL HTNDAPQTIA RLMNMGIAPY NITSSVTLVI AQRLARRLCN KCKRPVQLPK
NALLAEGFTQ EQIDAGLELY EPVGCDECTE GYKGRTGIYQ VMPITEGISS IILAGGNALQ
IAEEAQRIGI NDLRQSALLK VAQGITGLAE INRVTKD
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