| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2105 |
|---|
| Symbol | |
|---|
| ID | 6120310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 2206387 |
|---|
| End bp | 2207724 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641650049 |
|---|
| Product | two-component system, sensor protein |
|---|
| Protein accession | YP_001776595 |
|---|
| Protein GI | 170731162 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAA CCGAGGCACA GTCATGTTCG AAAGGGCGAC ACGCGCGCTA CCGGCGCCGG
TTAAGAAGCC GAATCATTTT ATCCTTCTTA TTTCTTGGCT TTGCACTGAC TTCGCTGTTT
GCGTTTGCCA CAAATTGGGC ACGCGCACGG GTGGAAAACC AGCTCGTCGA AGAATTGATG
AACCGCAACA TAGACGAGTA TGCCAAGCGC TACTATATGG ATCCATCCCA TAGCCCTGAT
CTGCCAGTAC AACAGATAAA AGCATTCTAC TATCCACGGG ATAAATTTGA CCGCGTCAGG
TTAGAACGCC CTGATTGGGC AGCACTCCCG AATGGCAATC ACAATGTGAT TGGCTTAGAC
AATGCTGGAA AACTATTTGC GTATTACAAA CTCGCGGTAC GCAAAGCCTA TGATGCTTGG
TTTTTCTTGG CTTACGACAT GACCGAGGCT ATACGTGGCG AGCGACAGCT CAAACGTGCC
CTATACATTT CTGTGCTGGT ATTCAGTGGG CTGTCCCTAC TTATTGGATG GTGGTCGGCC
TCAAAAGTGA TGAAGCCAGT TTCAGACTTA GCTAAGCTAC TACGTACTTA TCGTGGTCAA
ACTACAAATC CAAAACCTCT CGCCCCCCAC TTTCCAGATG ATGAAGTCGG CGAGCTTGCG
CGTGCATTGG ACGATTATTC AAGCAGACTC ACTGAAGTAG TACAAAGAGA TCGTGAATTC
AACGCAGATG TGAGTCACGA ATTGCGTACC CCACTGGCTG TCATCCGGGG GGCAACCGAA
CTGTTACTCA CCAAACCCGA AATGGACCCG AAGATCCAAC AACGGATACG GCGTATTCAA
CGCGCCGAAC AGCAATGCAG CGACCTGATT GGTGCATTGT TACTGCTTTC GCGCAACGAA
CGCGGCCATG GAAGCAGCAA TGTCGCCAAA GTTGCTGAAC AATTACTGGA TTCGCATCGC
GCCCAACTTG GCGGCAAACG AATCGAACTC ATCTTGGAGG ATAAACAAGA TCTAACGGTG
AATGCACCAG AATCTGCACT GTCCGTCGCA TTGGGGAACC TGATTGGCAA CGCAGTCAAG
TACACCTTTG AAGGACGAGT TACCGTGCGG GTACTTGAAA AAGCGGTCGA AATACAAGAT
ACGGGTCCTG GTCTCAGCGA ACAGGACGCT GCCAAACTAT TCCAACGTGG ATACCGCGGT
ACCCATGCAG GACATTCCCA AGGTGGGGGC ATTGGCCTAT CAATCGTGAG CCGATTATGC
GATTTATACG GCTGGAAAGT CAGCGTGCAA CCAGGAGACT CCTGCGGAGT GATTGCTACA
TTGCGTTTCT TTAAATAA
|
|---|
| Protein sequence | MHETEAQSCS KGRHARYRRR LRSRIILSFL FLGFALTSLF AFATNWARAR VENQLVEELM
NRNIDEYAKR YYMDPSHSPD LPVQQIKAFY YPRDKFDRVR LERPDWAALP NGNHNVIGLD
NAGKLFAYYK LAVRKAYDAW FFLAYDMTEA IRGERQLKRA LYISVLVFSG LSLLIGWWSA
SKVMKPVSDL AKLLRTYRGQ TTNPKPLAPH FPDDEVGELA RALDDYSSRL TEVVQRDREF
NADVSHELRT PLAVIRGATE LLLTKPEMDP KIQQRIRRIQ RAEQQCSDLI GALLLLSRNE
RGHGSSNVAK VAEQLLDSHR AQLGGKRIEL ILEDKQDLTV NAPESALSVA LGNLIGNAVK
YTFEGRVTVR VLEKAVEIQD TGPGLSEQDA AKLFQRGYRG THAGHSQGGG IGLSIVSRLC
DLYGWKVSVQ PGDSCGVIAT LRFFK
|
|---|
| |