Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2088 |
Symbol | |
ID | 6120292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2188773 |
End bp | 2189861 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641650034 |
Product | ribonuclease D |
Protein accession | YP_001776581 |
Protein GI | 170731148 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.227904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGCATT GGATCCAGCA CCCCGACACT CTCGCTACCT GGTGGGATCG AAAACCAACC CGAATCGGTA TGGATACCGA GTTCATCCGA GAAGGCACTT TTTGGCCAGA ATTAGCGCTG GTACAGATCG CAATTGAAGA TGAAATATTA CTGGTGGACC CACTGGTCCC CGGCATGACC GACGCGCTGG GACTCTGGTT GGCCGCTCCG AATGTCATCA AAATTATGCA CAGCGCCAGT GAGGACTTAA TTGCATTCAA GTATGCCTGT GGTGTGCTAC CACGGCCGCT GTTTGATACG CAAATTGGGG CTGCATTGAC GGGCTTGGGT GGTGGGATGG GTTACCAGAA GTTGGTGGCC AAAGTTACCA ATGTGGAATT GGGAAAAGGC GAAACACGCT CAGACTGGAT GCACCGACCA CTCACGCCAG CGCAACTAGA CTACGCGGCT AACGATGTCC GCTATTTATT TGTATTGCAT GACACGCTCA CAGAACGGTT AGCAGAAATG AGCCGCAGTG CTTGGTTGGA AGAGGACTGC ACACGATTGA CCGACAATAT CGAACAAAAC GAGAACGAAC GCTGGCCGCA TCTGGCAATA CGTTCAGCAC AACTTCTTGA CGCTCCAGCA CAGTACCGCC TGCTGCGCTT ATTGCGCTGG CGGGAAACAT CAGCACGCTC CAGCAACAAA CCACGCAACT GGATACTGAA CAACGAACTG GCGAGCATTC TGGCACGGTT CCCTCCTCCC AATCTGACCG AACTGCGATA CCAGCTTAAA AAGTTCAATA AATCCTGGGA CCCGCTCGCC ACTCAAATAC TGGAAGCGCT ACAGACTCCT CTTGCCGATG AAGCGCAAGC GCCATTGGTA ACTGCACCCA GCGATGCAGA CAAAGCGTTG CTCAAGCAAC TACAGAAAAT CGTCGCCGAA TGTAGCTATG ATCTAGGTTT ACCTGAGGGT ATCCTGGCGT CGCGTCGTCA TTTAGAAGCT CTCATCGAAC AACGCCGATG GCCAAACTCA CTCGGCCAAT GGCGCCGCTC TCTGCTCGAA ACGCAGTTAC AACCATTGTT ATCTATGTCA GATACCTAA
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Protein sequence | MPHWIQHPDT LATWWDRKPT RIGMDTEFIR EGTFWPELAL VQIAIEDEIL LVDPLVPGMT DALGLWLAAP NVIKIMHSAS EDLIAFKYAC GVLPRPLFDT QIGAALTGLG GGMGYQKLVA KVTNVELGKG ETRSDWMHRP LTPAQLDYAA NDVRYLFVLH DTLTERLAEM SRSAWLEEDC TRLTDNIEQN ENERWPHLAI RSAQLLDAPA QYRLLRLLRW RETSARSSNK PRNWILNNEL ASILARFPPP NLTELRYQLK KFNKSWDPLA TQILEALQTP LADEAQAPLV TAPSDADKAL LKQLQKIVAE CSYDLGLPEG ILASRRHLEA LIEQRRWPNS LGQWRRSLLE TQLQPLLSMS DT
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