Gene Xfasm12_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2081 
SymbolmutL 
ID6120285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2178326 
End bp2180191 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content58% 
IMG OID641650027 
ProductDNA mismatch repair protein 
Protein accessionYP_001776574 
Protein GI170731141 
COG category[L] Replication, recombination and repair 
COG ID[COG0323] DNA mismatch repair enzyme (predicted ATPase) 
TIGRFAM ID[TIGR00585] DNA mismatch repair protein MutL 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATCC GTCAGCTACC CGAGATTTTG ATTAACCAGA TTGCCGCCGG AGAGGTGGTT 
GAGCGTCCCG CCTCGGTGGT TAAAGAGTTG GTTGAGAATG CAATCGATGC CGGTGCGACG
CGTGTGGACA TTGAGTTGGA AGCAGCAGGG GTGCGCTTGA TCCGCATCCG TGACAATGGC
CACGGTATGG CTGCTCAGGA ATTGCCGCTG GCAGTCTTGC GGCACGCTAC CAGCAAGATT
GCCTCATTGG ATGATTTGGA AGCGGTCGCC ACACTGGGTT TCCGTGGTGA GGCACTGCCT
TCGATTGCTT CGGTGAGTCG GTTTACCTTG ATGTCGCGTC GTGCCACGGA TGAACACGGC
GCGGTATTGC AGATTGAGGG AGGTACGCTG GGCGAGGTGA TCCCCCATGC GCATGCACCG
GGGACCACCG TTGAGGTGCG TGAGTTGTTC TATAACGTGC CAGCGCGGCG TAAGTTCCTC
CGTGCTGAGC GTACCGAACT GGGGCATATT GAGGAATGGG CACGTTCTCT GGCGCTGGCG
CATCCAGATT TAGAATTGCG TCTCTCACAT AACGGTAAAC TTTCGCGTCG CTATAAGCCG
GGTGACTGGT ATTCAGATGC GCGCTTGATC GAGATTTTGG GAGAAGATTT TGCGCATCAG
GCATTGCGTG TAGATCACAG TGGCGCGGGG TTACGTCTGC ATGGGTGCAT TGTGCAGCCG
CATTACTCGC GTTTGAATGC GGATCAGCAA TATTTGTACG TCAATGGACG TCCAGTCCGT
GATCGTAGTG TTGCTCACGC CGTCAAACAG GCTTACAGCG ATGTGCTCTA TCAGGGGCGA
CATCCGGCGT ATGTGCTGTT TCTGGAACTT GACCCGGCAC GTGTGGACGT GAACGTACAC
CCGGCCAAAC ATGAGGTGCG TTTCCGCGAT GCACGGCTCA TCCATGACTT TGTCTACCGT
ACTGTTCAGG GCACGTTGGC ACAGACGCGT GCGGGTACGC CGCCGCTAGC GGTGGGTGTG
GGTGATGTGG AGGGGGAGGG GGAGGGTGCA AGGCCTCCTG GCCGTCATGC GGTGTCGTTT
TCAGGGCGGC GTGGTGGTGC CTCGCATGTG CTGGGGAGCT ACTCTACCAG CACGGCTCCT
CTGATGCAGG GTGTGCCAAG CGTGTCTGTT GCTGACGCGC CCGCAGCGTA TGCAGCCCTG
TATGCTGCGC CACCGACACA GGTAATGGAT GCAGTGCCAC AGATGCAGAC GGGGCTACCG
CTGGCTGCTG GGGCGGGCGA CGTACCGCCA CTTGGCTATG CCATCGCACA GCTGCATGGC
ATTTATATCC TGGCTGAGTG TGCCGATGGG CTGATCGTGG TGGATATGCA TGCGGCTCAC
GAGCGTATTG GTTACGAGCG CCTGAAGCGA GCCCATGATG GTATTGGGTT ACGTACCCAG
CCACTGTTGG TGCCGATGAC GTTGATGGTT GCCGAGCGTG AGGCTGATGT TGCTGAGTGT
GAAGCTGAGA CGTTGGCCAG TCTTGGCTTT GAAGTGACCC GCAGTGGTCC AGGTTCGTTA
CAGGTGCGTA GCATCCCTGC GTTGCTTTCC CAAGCGGAGC CAGAAATGTT ACTGCGCGAT
GTGCTCAGCG ATCTGAGTGA ACATGGCCAC ACCCGGCGTG TGGCTGAGGC GCGTGATACG
TTGCTTGCGA CGATGGCTTG TCATGGTGCT GTGCGTGCTC ACCGGCGCTT GAGCATTTCC
GAGATGAACG CGTTGTTGCG TGATATGGAG GCTACGGAGC GCTCCGGTCA ATGTAATCAC
GGACGTCCTA CCTGGGCGCG TTTTAGTTTG GCTGAGATCG ATCGTTGGTT TCTTAGGGGG
CGGTGA
 
Protein sequence
MPIRQLPEIL INQIAAGEVV ERPASVVKEL VENAIDAGAT RVDIELEAAG VRLIRIRDNG 
HGMAAQELPL AVLRHATSKI ASLDDLEAVA TLGFRGEALP SIASVSRFTL MSRRATDEHG
AVLQIEGGTL GEVIPHAHAP GTTVEVRELF YNVPARRKFL RAERTELGHI EEWARSLALA
HPDLELRLSH NGKLSRRYKP GDWYSDARLI EILGEDFAHQ ALRVDHSGAG LRLHGCIVQP
HYSRLNADQQ YLYVNGRPVR DRSVAHAVKQ AYSDVLYQGR HPAYVLFLEL DPARVDVNVH
PAKHEVRFRD ARLIHDFVYR TVQGTLAQTR AGTPPLAVGV GDVEGEGEGA RPPGRHAVSF
SGRRGGASHV LGSYSTSTAP LMQGVPSVSV ADAPAAYAAL YAAPPTQVMD AVPQMQTGLP
LAAGAGDVPP LGYAIAQLHG IYILAECADG LIVVDMHAAH ERIGYERLKR AHDGIGLRTQ
PLLVPMTLMV AEREADVAEC EAETLASLGF EVTRSGPGSL QVRSIPALLS QAEPEMLLRD
VLSDLSEHGH TRRVAEARDT LLATMACHGA VRAHRRLSIS EMNALLRDME ATERSGQCNH
GRPTWARFSL AEIDRWFLRG R