Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2081 |
Symbol | mutL |
ID | 6120285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2178326 |
End bp | 2180191 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641650027 |
Product | DNA mismatch repair protein |
Protein accession | YP_001776574 |
Protein GI | 170731141 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAATCC GTCAGCTACC CGAGATTTTG ATTAACCAGA TTGCCGCCGG AGAGGTGGTT GAGCGTCCCG CCTCGGTGGT TAAAGAGTTG GTTGAGAATG CAATCGATGC CGGTGCGACG CGTGTGGACA TTGAGTTGGA AGCAGCAGGG GTGCGCTTGA TCCGCATCCG TGACAATGGC CACGGTATGG CTGCTCAGGA ATTGCCGCTG GCAGTCTTGC GGCACGCTAC CAGCAAGATT GCCTCATTGG ATGATTTGGA AGCGGTCGCC ACACTGGGTT TCCGTGGTGA GGCACTGCCT TCGATTGCTT CGGTGAGTCG GTTTACCTTG ATGTCGCGTC GTGCCACGGA TGAACACGGC GCGGTATTGC AGATTGAGGG AGGTACGCTG GGCGAGGTGA TCCCCCATGC GCATGCACCG GGGACCACCG TTGAGGTGCG TGAGTTGTTC TATAACGTGC CAGCGCGGCG TAAGTTCCTC CGTGCTGAGC GTACCGAACT GGGGCATATT GAGGAATGGG CACGTTCTCT GGCGCTGGCG CATCCAGATT TAGAATTGCG TCTCTCACAT AACGGTAAAC TTTCGCGTCG CTATAAGCCG GGTGACTGGT ATTCAGATGC GCGCTTGATC GAGATTTTGG GAGAAGATTT TGCGCATCAG GCATTGCGTG TAGATCACAG TGGCGCGGGG TTACGTCTGC ATGGGTGCAT TGTGCAGCCG CATTACTCGC GTTTGAATGC GGATCAGCAA TATTTGTACG TCAATGGACG TCCAGTCCGT GATCGTAGTG TTGCTCACGC CGTCAAACAG GCTTACAGCG ATGTGCTCTA TCAGGGGCGA CATCCGGCGT ATGTGCTGTT TCTGGAACTT GACCCGGCAC GTGTGGACGT GAACGTACAC CCGGCCAAAC ATGAGGTGCG TTTCCGCGAT GCACGGCTCA TCCATGACTT TGTCTACCGT ACTGTTCAGG GCACGTTGGC ACAGACGCGT GCGGGTACGC CGCCGCTAGC GGTGGGTGTG GGTGATGTGG AGGGGGAGGG GGAGGGTGCA AGGCCTCCTG GCCGTCATGC GGTGTCGTTT TCAGGGCGGC GTGGTGGTGC CTCGCATGTG CTGGGGAGCT ACTCTACCAG CACGGCTCCT CTGATGCAGG GTGTGCCAAG CGTGTCTGTT GCTGACGCGC CCGCAGCGTA TGCAGCCCTG TATGCTGCGC CACCGACACA GGTAATGGAT GCAGTGCCAC AGATGCAGAC GGGGCTACCG CTGGCTGCTG GGGCGGGCGA CGTACCGCCA CTTGGCTATG CCATCGCACA GCTGCATGGC ATTTATATCC TGGCTGAGTG TGCCGATGGG CTGATCGTGG TGGATATGCA TGCGGCTCAC GAGCGTATTG GTTACGAGCG CCTGAAGCGA GCCCATGATG GTATTGGGTT ACGTACCCAG CCACTGTTGG TGCCGATGAC GTTGATGGTT GCCGAGCGTG AGGCTGATGT TGCTGAGTGT GAAGCTGAGA CGTTGGCCAG TCTTGGCTTT GAAGTGACCC GCAGTGGTCC AGGTTCGTTA CAGGTGCGTA GCATCCCTGC GTTGCTTTCC CAAGCGGAGC CAGAAATGTT ACTGCGCGAT GTGCTCAGCG ATCTGAGTGA ACATGGCCAC ACCCGGCGTG TGGCTGAGGC GCGTGATACG TTGCTTGCGA CGATGGCTTG TCATGGTGCT GTGCGTGCTC ACCGGCGCTT GAGCATTTCC GAGATGAACG CGTTGTTGCG TGATATGGAG GCTACGGAGC GCTCCGGTCA ATGTAATCAC GGACGTCCTA CCTGGGCGCG TTTTAGTTTG GCTGAGATCG ATCGTTGGTT TCTTAGGGGG CGGTGA
|
Protein sequence | MPIRQLPEIL INQIAAGEVV ERPASVVKEL VENAIDAGAT RVDIELEAAG VRLIRIRDNG HGMAAQELPL AVLRHATSKI ASLDDLEAVA TLGFRGEALP SIASVSRFTL MSRRATDEHG AVLQIEGGTL GEVIPHAHAP GTTVEVRELF YNVPARRKFL RAERTELGHI EEWARSLALA HPDLELRLSH NGKLSRRYKP GDWYSDARLI EILGEDFAHQ ALRVDHSGAG LRLHGCIVQP HYSRLNADQQ YLYVNGRPVR DRSVAHAVKQ AYSDVLYQGR HPAYVLFLEL DPARVDVNVH PAKHEVRFRD ARLIHDFVYR TVQGTLAQTR AGTPPLAVGV GDVEGEGEGA RPPGRHAVSF SGRRGGASHV LGSYSTSTAP LMQGVPSVSV ADAPAAYAAL YAAPPTQVMD AVPQMQTGLP LAAGAGDVPP LGYAIAQLHG IYILAECADG LIVVDMHAAH ERIGYERLKR AHDGIGLRTQ PLLVPMTLMV AEREADVAEC EAETLASLGF EVTRSGPGSL QVRSIPALLS QAEPEMLLRD VLSDLSEHGH TRRVAEARDT LLATMACHGA VRAHRRLSIS EMNALLRDME ATERSGQCNH GRPTWARFSL AEIDRWFLRG R
|
| |