Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2052 |
Symbol | murE |
ID | 6120255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2152585 |
End bp | 2154060 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641650000 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_001776548 |
Protein GI | 170731115 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTGG CGCAGCTATT GCCCGATATT CCGCAAGCGC GTGATGTCGT GATCTCTGGT TTGGTGATGG ATAGCCGTGA GGTGCAGCCG GGTGATGCGT TTGTCGCGGT TGCAGGGTTT GGCGCTCACG GGTTGTGTTT TATTGAGGAT GCGTGTGCCA GAGGTGCTGT TGCAATTTTG TTTGAGCCGC CCGCACCGCA GGGGGTGTCG GTGCCGGATG GTGCGATTGC AGTGCATGGT TTACGTGCGC GTCTGGGTGC GATGGCGGAT CGTTTCCATG GCCATCCGTC GCAGGCGATG ACCATGGTGG GGGTCACTGG CACCAATGGT AAGACGTCCA CTGTGCAGTT GTTGGCCCAG GCTTGGCATC GTCTGGGTGT GCGCAGTGCG ACCTGTGGAA CGCTCGGTGT GGGTTTGTAC GATCAGCTGG TACCGACGGG TTTCACGACG CCGCTGGTAT TGCAATTGCA TCAGTGTCTG GGACAACTGC GTGATGATGG TGCGCAGGCG GTGGCGATGG AAGTCAGTTC CCACGCTCTT GACCAGGGAC GCGTGGATGG CGTGCATTAT GACGTTGCGG TGTTCACCAA TCTGACGCGC GATCATCTTG ATTATCACGG TGACATGGAG CACTACGGTG CGGCTAAGGC TCGCTTGTTC GCGCATCAGG ATGTGCAGGC GGCGGTGATC AATGTGGATG ATCTTTTCGG TTTGCGTCTG TTACATGGTT TGGCCAAGGG GGTGCGGCGG GTTGGAGTCA GCGTGTGTGG TCACACGGAT GCAGATGTGA TGGCGCAGCA TCTGAGTCTG AATCTTCAGG GTATCGGGTT TGATCTTGTC ATCGGTGCGG ATCGTGCGCC GGTGCGTTCA CCTCTGATGG GACGTTTCAA CGTTGATAAT TTGCTTGCGG TAGCAGGTGT TCTTTATGCG CTGGATTACG CGCTGTCTGA GATTGCTGCG GTGCTGTCGA CGTTGCGGCC GATTCATGGC CGGATGAATC GTTTGGGTGG TCAGGATGGG CAGCCTGTGG TGGTTGTTGA TTACGCACAT ACCCCTGATG CGCTGGGGCA GGTGTTGTCC AGTTTGAGTA GCCATGTATG CGGTCGTTTG ATTTGTGTGT TTGGCTGTGG CGGTGAGCGC GATAGGGGTA AACGTTCACA GATGGCTGTT ATTGCCGAGA GTAACGCCGA TGTTGTGTTG GTGACCGATG ATAATCCGCG TGGTGAGGAT GGTGATGGCA TTGTTGCTGA CATTCTGGCC GGTTTTGTGC GTCCCAACCT CGTAAAAGTG CAGCGTGACC GCTCTGCTGC GATTGCGGCA GCCGTTGGTA TAGCCAGTGC AGAGGATGTT GTGTTGATTG CTGGCAAAGG TCACGAGCGA TATCAGGAGG TTGCTGGGGT GCGTCATCCG TTCGATGACA CTGAGGTTGC TATGCGTGTG CTGGCAGCAA TGTCGGCCCA GGAGACTGTC CGATGA
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Protein sequence | MPLAQLLPDI PQARDVVISG LVMDSREVQP GDAFVAVAGF GAHGLCFIED ACARGAVAIL FEPPAPQGVS VPDGAIAVHG LRARLGAMAD RFHGHPSQAM TMVGVTGTNG KTSTVQLLAQ AWHRLGVRSA TCGTLGVGLY DQLVPTGFTT PLVLQLHQCL GQLRDDGAQA VAMEVSSHAL DQGRVDGVHY DVAVFTNLTR DHLDYHGDME HYGAAKARLF AHQDVQAAVI NVDDLFGLRL LHGLAKGVRR VGVSVCGHTD ADVMAQHLSL NLQGIGFDLV IGADRAPVRS PLMGRFNVDN LLAVAGVLYA LDYALSEIAA VLSTLRPIHG RMNRLGGQDG QPVVVVDYAH TPDALGQVLS SLSSHVCGRL ICVFGCGGER DRGKRSQMAV IAESNADVVL VTDDNPRGED GDGIVADILA GFVRPNLVKV QRDRSAAIAA AVGIASAEDV VLIAGKGHER YQEVAGVRHP FDDTEVAMRV LAAMSAQETV R
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