| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2051 |
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| Symbol | |
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| ID | 6120254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2151182 |
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| End bp | 2152588 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641649999 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001776547 |
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| Protein GI | 170731114 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCTA TGCCACTTTC GTTAATTGCG TACTGGACCG GCGGTTATCT GCACGGTGAG
GATGTCAGGG TGTGTGCAAT TGGTCATGAC ACCCGTGCGC TGGATGTTGG CGTGTTGTAT
GTGGCGTTGC GAGGCCAGCG TTTCGATGCG CATCTATTCT GCGCCGAAGC GGTGGCACGT
GGTGCGGCGG GGGTATTGGT TGATCACGTG TTGCCAGAGT TGGATGTTCC TCAGGTCGTT
GTGGCCGATA CTGAGCGTGC GCTTGCGGCG ATCGCTTCAG CCTTGCAGCG TGACCGGACA
TCTTTTGTGT TGGCATTGAC TGGGTCCAAT GGAAAAACCA GTGTTAAGGC AATGCTTGTA
TCCATTTTGG AGCATGCTGC GGCACAGAGT AGTACGGTGG TCTATGCGAG TTCTGGTAAC
CGCAACAATG AGATTGGCCT GCCGTTGGCA GTGATTGCCG CGCCCGATAA TGCCGATTTT
GCGGTGTATG AGATGGGTGC TGGCAAGTTG GGCGACATCG GTTATTTGAC TGACATCGTT
ACGCCGGATG TGGCGTTGGT TAATAACATC GCACCGGCGC ACTTGGAGCG CATGGGGAGC
TTGCTTGGTG TGGCGCGTAC CAAAGGTGAG ATCTATGCCG CGTTGCGGCC TGGTGGTACT
GCTGTGATCA ATATGGATGA TGCGTTTGCT TTGTGGTTTG AGCAGCAGTG TGTTCCGGCT
GGTTGTGCTG TGTTGCGGTT CGGTTTGCAG GCAACTGCTG ACGTTACTGC GTATAGCCTG
CAATTCAGTG AGGACAGTGT GCGTTTTGTA CTTGTGACGC CACAGGGGGA GGTGCCGGTG
TGCTTGGCGC TGTCTGGGCG TCACAATGTG TGTAATGCGC TGGCAGCGGC AGCAATGGCG
TTGGTTGCTG GTATTCCTTT GTCGCAGATT GCGGCTGGTC TTGGTTTGGC TCGGTCGGTG
GCCGGTCGCC AAGTTGCGCA TGCTTTACCC GGTGGTGCGG TATTGATTGA TGATAGTTAT
AACGCCAATC CTGGGTCGCT GGATGTGGCA ATCGATACGT TGACGACTGC TTCCGGCCCA
GGATGGTTGG TGCTTGGCGA TATGCGCGAG CTTGGTTTGG AGGGTGTGGC GCTGCATGCC
GCTGCTGGAC GTCGTGCACG TCAAGCCAAA GTAGCCCGTT TATATGCACT GGGTGAGTTG
AGTGCAGTTG CAGCGCGGGA GTTTGGTGAG GGTGGATATG TGTTTGCCGA TCATGATGCG
TTGGCTGCGG TGTTGTGGGA TGACTTGATG CATGTACCAG GTGGGGTGCC GCCGCGGGTG
CTTGTGAAGG GGTCGCGGGG TAGTGCGATG GACAAAATTG TGGGCGCTCT GTTGTCGAGT
GCGGAGGGCG TAGCGCATGT TGTTTGA
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| Protein sequence | MRSMPLSLIA YWTGGYLHGE DVRVCAIGHD TRALDVGVLY VALRGQRFDA HLFCAEAVAR
GAAGVLVDHV LPELDVPQVV VADTERALAA IASALQRDRT SFVLALTGSN GKTSVKAMLV
SILEHAAAQS STVVYASSGN RNNEIGLPLA VIAAPDNADF AVYEMGAGKL GDIGYLTDIV
TPDVALVNNI APAHLERMGS LLGVARTKGE IYAALRPGGT AVINMDDAFA LWFEQQCVPA
GCAVLRFGLQ ATADVTAYSL QFSEDSVRFV LVTPQGEVPV CLALSGRHNV CNALAAAAMA
LVAGIPLSQI AAGLGLARSV AGRQVAHALP GGAVLIDDSY NANPGSLDVA IDTLTTASGP
GWLVLGDMRE LGLEGVALHA AAGRRARQAK VARLYALGEL SAVAAREFGE GGYVFADHDA
LAAVLWDDLM HVPGGVPPRV LVKGSRGSAM DKIVGALLSS AEGVAHVV
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