| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2042 |
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| Symbol | lpxC |
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| ID | 6120245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2140417 |
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| End bp | 2141358 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641649990 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001776538 |
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| Protein GI | 170731105 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000139774 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCATT TTTTCAGACT TCCGCCTATG AGCCAGCAAC GTACCCTTAA CAACACGATT
CGCGCGACTG GCGTTGGTCT GCACAGCGGC AATAAGATCC ATATTACCCT CCGTCCTGCT
TCGGTGAATC ACGGTATCGT GTTCCGGCGC GTGGACTTGG ATCCTGTGGT TGAAATCCCT
GCTAGTGGGG ATTTGGTGAC CGAGGTGATC TTATGCACTG GTTTGACGCG CAATGGGGCT
AAAGTACAGA CGGTCGAACA TTTGATGTCA GCCTTTGCTG GGCTTGGTAT CGACAACGCT
ATTGTGGATC TGTCGTCGGC TGAGTTACCG ATTATGGATG GATCTTCTGC GCCGTTTGTA
TTCCTGTTGC AGTCGGCGGG TATCTTAGAG CAGAACGCTG CTAAGCGTTT CATCCGCATC
AAGCGTTCTG TGGAGGTGCG CCAAGGGGAT AAGGTCGCCA AGTTTAGCCC TTACGATGGT
TATAAATTGG GTTTTACCAT TGAGTTCGAT CATCCAATGA TCCCGCATAA ACAGTCGCAT
TATGAGATGG AGTTTTCTAC TGCGGCTTAT ATCAAGGAAA TTTCTCTGGC GCGCACTTTT
GGTTTTATGC ATGACTTGGA AGATATGCGT GAGCGTAACC TTGGACTGGG CGGTTCAATG
GACAATGCGA TCTTGCTGGA CGACTTCCGT GTGCTCAATG AGGATGGCTT GCGCTATGGC
AACGAGTTCG TGCGTCACAA AATACTTGAT GCAATCGGTG ATCTTTACTT AATTGGTGGC
CCGATTTTGG GGGCTTATGA GGCATTTAAG TCTGGTCATG CGCTGAACAA TAAGCTGGTT
CGTGCTGTAC TTGCCGATGA GACTTCTTGG GAGTGGATCA GCTTCCCTAG TTCAGCCGCT
GAGCAGCCGC CTGTCGTCTA CACGCATCCC GCTTGCATTT GA
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| Protein sequence | MLHFFRLPPM SQQRTLNNTI RATGVGLHSG NKIHITLRPA SVNHGIVFRR VDLDPVVEIP
ASGDLVTEVI LCTGLTRNGA KVQTVEHLMS AFAGLGIDNA IVDLSSAELP IMDGSSAPFV
FLLQSAGILE QNAAKRFIRI KRSVEVRQGD KVAKFSPYDG YKLGFTIEFD HPMIPHKQSH
YEMEFSTAAY IKEISLARTF GFMHDLEDMR ERNLGLGGSM DNAILLDDFR VLNEDGLRYG
NEFVRHKILD AIGDLYLIGG PILGAYEAFK SGHALNNKLV RAVLADETSW EWISFPSSAA
EQPPVVYTHP ACI
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