| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2034 |
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| Symbol | |
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| ID | 6121117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2127836 |
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| End bp | 2130724 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641649982 |
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| Product | zinc protease |
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| Protein accession | YP_001776530 |
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| Protein GI | 170731097 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.554182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCC CGCTTCCCCT GCTCATCATC GGTATTCTCG GTCTCGGAAC CGCCACTTTC
ACACCCCGGG TCAGCGCGAC ATCGGGAACT CTGACGATTT CCAGCAAAGC CATTCCGAAA
CAAGACATTC CAGAGATCGC CTACGAGCGC TTCACCCTGC CCAATGGGTT GACGGTGATC
GTCCATGAGG ACCACAAAGC ACCCGTTATT GCCGTCAACG TGTGGTATCA CATCGGTTCG
GCAGACGAGC CTGCCGGGAA AACTGGGTTC GCACATCTGT TTGAGCATTT GATGTTCTCT
GGCTCGGAAA ATCACAAGGC CAGCTACTTT CAACCATTCG AGAAAATCGG TGCAACCGGG
ATGAATGGCA CCACGTGGTT TGACCGTACC AATTATTTCC AGACTGTACC GACGACTGCG
CTGGATATGG CGCTTTGGAT GGAATCAGAC CGTATGGGCC ATCTGCTTGG CGCAATCGGC
CAGAAGGAAT TGGATACGCA GCGTGGCGTG GTCAAAAATG AAAAACGCCA AAAAGAAAAC
GTGCCCTACG GACGGGTGAC CCAAAATATT CTGTCCAATC TCTTTCCAGC CAATCACCCA
TATCAGCACA GCACGATTGG TTCAATGGAG GATCTGGAGG CCGCTTCGCT GGCCGATGTA
AAAAGCTGGT TCCAAGCACA TTATGGTGCA GCCAATGCGA CCTTGGTGTT AGCCGGAGAC
ATCACGGTGG CCGAGGCACG CGACAAAGCG GCAAAGTATT TCGGCGATAT CCCCGCCGGC
CCTCCGGTGG CACACCAGCA CCCCTGGATC ACCCCGCTAC CGGCACAGAA GCGCGGTGTG
CAATACGATC GGGTATCGCA ACCACGGTTG TATCGCACCT GGATCACCCC AGAACTGGGA
AGCGATACTG TGGTGCAACT GGACTTGGCG ACAACTATTC TTGGTGGCAA CAAAACTTCC
CGTCTGTATC AGCGCTTGGT CTATAAGGAC AAGCTGGCTG ACAGCATATC GGCCAGTATT
TCTCCATTTG CGCTGGCCAG CCAAATGCAA ATCAACGCCG ATGTGAAACC TGGGATCGAT
CCTGCCAAGG TTGAAGTAGC GATTGCCGAG GAATTAAAAA AGTTTCTGGC CGAAGGCCCA
AGTGATGATG AATTGCAACG CGCTCAGATG AACTACCGCT CCGATCTGGT GCGCGGCCTG
GAGAGGGTCG GTAATAAGGC CGCGATCCTC GCTGCGGGAC AGCTTTATCT CAATGATCCA
GGTGCCTACA AGCTCGATCT ACAACGTGCT GCACAGGCCA CGCCCAACAG TGTCAAACAG
GCAGCAGCAA CATGGTTCAG CAAGGGGGAC TATCTGCTGA CCGTGTTACC AGTAGGCCCC
AATGTTGATC CAGCGACTGA GGATGCAAAG GTCACTGCGC GCCCCGCCGA ACCAGGCAAA
CCAGCAGCCA TGCTAGCGCC CAAAGTTCAT TACCACGTGA CAGCATCGCA GGTGGACCGC
CGCTCTGGGG TACCGGAAGT CACACAGTTC CCTTCTCTAA ATTTCCCTGC ATTGCAGCGC
AGTAAGCTGA AAAACGGCAT CGAAGTCATC TTGGCCGAAC GGCACACGAT TCCGGTAACC
CAAATCGTGC TGTTATTTGA CGCTGGCTAC GCAGCCGACC AAGACGCTAA ACCGGGTACG
GCAAACTTCA CCGCAACGTT GATGAACGAA AGCACGACTT CGTTGGACTC AGTCGAAGTG
TCACAGCAGC ATCAACGTCT GGGTGCCATC AGCAGTATTT CCTGCGATCT GGATTCCTGT
CGTGCTTCGC TGAACGCACT CAACGATCAA CTTATCCCAT CGCTGCACCT GTTCGCCGAT
CTGGTACGCA ATCCAGCCTT CAAGGCGACA GACATTGAAC GGATACGCGG CCAATGGCTG
GCCGCCATCG CGCAAGAGAA AACCCAGCCG CAGGGACTGG CTCTACGTAT TCTGCCGCCA
TTGTTATATG GGAAAGGGCA TCCTTACGGC ATCCCACTCA CCGGCAGCGG TACCAATGAA
GCGATCCAAA GTCTGACAGC TACAGACTTG AAAGATTTCC AGCAACGCTG GCTGCGCCCA
GACAATGTAC GCATCCTGGT GACCGGTCAT ACCACGCTTA AATCCATCAT CCCGCAGTTG
GAAGCCGCCT TTGGTGACTG GCAAGCTCCG AGCACGATCA AAAGCCACAA GCAGATTACC
GACGTGGCCG CACAGCTCAA ACCACGTATA TTCCTGATCC ATCGTCCAGA AGCGCAGCAG
TCATTGATTC TCGCCGGTCT GTTGGCTCCT CCGACGAAAG ATCCCGCTAA TCTGGAAATC
AATGTAGGTA ACGAGGCGTT CGGGGGCGGG GGCACCTTCA GTTCACGCCT GAACATGAAT
CTGCGCGAGG AAAAACATTG GGCTTATGGT GCACGTAGTG TGCTCCCCAA TGCACAGGGG
CAACGTCCTT ACGTGTTTAT CGCCCCCGTA CAAACCGACA AAACAGCCGA ATCCATCGCA
GAGATACAGA AAGAGGCACA AGACGTGATC GGTAACAAGC CGCTCACCCA AGAAGAAGTG
GAAAAGATCA AGCAACAGAT TATCCGTAGC CTGCCAGGCA GTTATGAAAC CAGCGGCGCA
GTGTTGGACG CAGTGGAAAG CATTGTCCGG TACGAACGCC CAGACAACTA CATACAGACT
CTCAAACCAC GCTTGGAAGC CATTGAGTCA ATCAGTGTAG AACGCGCCAT AAAACGCATC
ATCAATCCAA ATGCGATGAC CTGGGTCATC ATCGGTGACC TCAGCACCAT TGAGGCACCG
GTCCGCGCCC TGAAGCTGGC TGATGTGCAA GTCCTGGATA ACGACGGTAA CTCAGTCTCA
ACGCATTGA
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| Protein sequence | MLRPLPLLII GILGLGTATF TPRVSATSGT LTISSKAIPK QDIPEIAYER FTLPNGLTVI
VHEDHKAPVI AVNVWYHIGS ADEPAGKTGF AHLFEHLMFS GSENHKASYF QPFEKIGATG
MNGTTWFDRT NYFQTVPTTA LDMALWMESD RMGHLLGAIG QKELDTQRGV VKNEKRQKEN
VPYGRVTQNI LSNLFPANHP YQHSTIGSME DLEAASLADV KSWFQAHYGA ANATLVLAGD
ITVAEARDKA AKYFGDIPAG PPVAHQHPWI TPLPAQKRGV QYDRVSQPRL YRTWITPELG
SDTVVQLDLA TTILGGNKTS RLYQRLVYKD KLADSISASI SPFALASQMQ INADVKPGID
PAKVEVAIAE ELKKFLAEGP SDDELQRAQM NYRSDLVRGL ERVGNKAAIL AAGQLYLNDP
GAYKLDLQRA AQATPNSVKQ AAATWFSKGD YLLTVLPVGP NVDPATEDAK VTARPAEPGK
PAAMLAPKVH YHVTASQVDR RSGVPEVTQF PSLNFPALQR SKLKNGIEVI LAERHTIPVT
QIVLLFDAGY AADQDAKPGT ANFTATLMNE STTSLDSVEV SQQHQRLGAI SSISCDLDSC
RASLNALNDQ LIPSLHLFAD LVRNPAFKAT DIERIRGQWL AAIAQEKTQP QGLALRILPP
LLYGKGHPYG IPLTGSGTNE AIQSLTATDL KDFQQRWLRP DNVRILVTGH TTLKSIIPQL
EAAFGDWQAP STIKSHKQIT DVAAQLKPRI FLIHRPEAQQ SLILAGLLAP PTKDPANLEI
NVGNEAFGGG GTFSSRLNMN LREEKHWAYG ARSVLPNAQG QRPYVFIAPV QTDKTAESIA
EIQKEAQDVI GNKPLTQEEV EKIKQQIIRS LPGSYETSGA VLDAVESIVR YERPDNYIQT
LKPRLEAIES ISVERAIKRI INPNAMTWVI IGDLSTIEAP VRALKLADVQ VLDNDGNSVS
TH
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