Gene Xfasm12_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2014 
Symbol 
ID6121098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2106719 
End bp2107927 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content62% 
IMG OID641649965 
Product2-octaprenyl-6-methoxyphenyl hydroxylase 
Protein accessionYP_001776513 
Protein GI170731080 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID[TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase
[TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAGC TCCATGATGT TTTGATCGTC GGCGGCGGTT TGGTCGGCGC CAGCCTCGCG 
ATTGCCCTGG ACCAGATCGG CATGAACATT GGCCTGGTTG AAGTCACACC ACCGGGGGCG
CTACCCACGG TATTCGATGA GCGTACCCTC TGTTTCGCCG CAGCCACAGT AAACGCTTTA
GACGCCCTCA ATGTCATGAC ACGGATACGC CACGCCGCCG GCCCCATCCG GCGTATCCAC
GCCAGCCGCA CCGGCGACTT CGGCCGCGTG CGATTGGATG CCTCGACCTA CGGACGTGAC
GCCTTCGGCC AAGTAGTCAT TGCACGTGAT TTTGGCGAAG CGTTGGAACA CCGCCTCACC
GAACTCAAAC AACTCACCCG CTACCGCCCA GCACGCTGCA TCGCCGTGAC ACCCGTGACC
GATGGCATGC GCGGCGTACG GATCGCCCAT GCCGATGGCG AACAGCTCTT ACATGCACGC
CTGATCGTCG GTGCCGATGG CACACATAGC ACCGTACGCG AACTGCTGCA TATCGACACC
ACACAACACG ATTACTTCCA AACACTTTTC GTCGCACGGG TGCAAACCAC TCAAGCACCC
GACGGAACCG CCTACGAACG TTTCACCGAA CACGGCCCCA CGGCCCTGCT GCCTCGCGCC
GACCGTCACT ATGGCGCCAT TCATTGCGTC GCCCGTACCC AGGCCAATAC AGTCGCTGCC
CTGGATGACA GCGTCTGGCT GACACGGCTG CAACACGCCA TGGGCTGGCG CGCCGGTCGC
TTCATTGCCA GTAGCGCACG CAGCGCCTAC CCATTGATGC AAGTGATCGC ACAAGATCTG
ACCGCCGAAC GCGTGGCACT GCTCGGCAAC GCCGCACAGA CACTGCACCC CATAGGAGCC
CAAGGCTTCA ACCTGGGCCT GCGCGATGCA CTCACCTTGG CTGAAATGAT CGCCGCCGAT
CACACCGACC CCGGCGCAAC CGCACTGCTC ACCGCCTATA CCGCACGACG GCGTGCAGAC
CGCGAACAGA CACTCATGTT TTCTAAGGGC TTGGCACAAC TCACCAGCAA TGGATTGCCG
CTGCTGCGAC CGCTACGCAG TCTCGGCCTG CTTGCCGTCT CCCACATCGG CGGGCTGCAA
GCACTCCTGG TCAACGGCGC GATGGGCTTC CGTGGCGACG TACCGCAATT GTGTCGCAAC
AGCGTATGA
 
Protein sequence
MNQLHDVLIV GGGLVGASLA IALDQIGMNI GLVEVTPPGA LPTVFDERTL CFAAATVNAL 
DALNVMTRIR HAAGPIRRIH ASRTGDFGRV RLDASTYGRD AFGQVVIARD FGEALEHRLT
ELKQLTRYRP ARCIAVTPVT DGMRGVRIAH ADGEQLLHAR LIVGADGTHS TVRELLHIDT
TQHDYFQTLF VARVQTTQAP DGTAYERFTE HGPTALLPRA DRHYGAIHCV ARTQANTVAA
LDDSVWLTRL QHAMGWRAGR FIASSARSAY PLMQVIAQDL TAERVALLGN AAQTLHPIGA
QGFNLGLRDA LTLAEMIAAD HTDPGATALL TAYTARRRAD REQTLMFSKG LAQLTSNGLP
LLRPLRSLGL LAVSHIGGLQ ALLVNGAMGF RGDVPQLCRN SV