Gene Xfasm12_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_2005 
Symbol 
ID6121089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2092027 
End bp2094675 
Gene Length2649 bp 
Protein Length882 aa 
Translation table11 
GC content63% 
IMG OID641649957 
ProductBeta-glucosidase 
Protein accessionYP_001776505 
Protein GI170731072 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.346494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATTGC CCATTGCAGC CCCCCTCACA CTGGCAACCG CACTCATCCT GTTACTCGCC 
ACAACACCCA CCACTGCGGC CCCCTCCCCC GAACAACACG CCGCCGCCCT AGTGGCACAG
ATGACCCGCC AAGAGAAAAT TGCGCAAACA ATGAACGCCG CCCCGGCCAT CCCACGCCTG
GGCATCCCCG CCTACGACTG GTGGAGCGAA GGACTGCACG GCATCGCCCG CAACGGCTAC
GCCACAGTAT TTCCCCAAGC CATTGGCCTG GCAGCAAGCT GGAACACCGA CCTACTGCAA
CACGTCGGCA CCGTCACTTC CACCGAAGCC CGCGCCAAAT TCAACCTCAC CGGCGGCCCC
GGCAAAGACC ACCCCCGCTA TGCAGGACTC ACCCTCTGGT CCCCTAACAT CAACATTTTC
CGTGACCCAC GTTGGGGCCG CGGCATGGAA ACCTACGGTG AAGACCCCTA CCTCACCAGC
CAACTTGCAG TGAGCTTCAT CCGTGGCCTC CAAGGGAACA TCCCCGACCA CCCACGGACC
ATCGCCACCC CCAAACACTT CGCCGTACAC AGTGGCCCAG AACCGGGACG CCACAGCTTT
GACGTGGATG TCTCCGCATA CGACCTAGAA GCGACCTATA CCCCCGCATT CCGCGCCGCG
ATTGTCGACG GCCATGCTGG CTCAGTGATG TGCGCCTACA ACGCCCTACA TGGCACACCC
GCATGTGCCT CCGACTGGCT ACTCAACACA CGTCTGCGCA ACGACTGGGG CTTCAACGGC
TTTGTGGTCT CCGACTGCGA CGCAATCGAA GACATGACCC GATTCCATTT CTTCCGTCAA
GACAACGCCA GCGCCTCAGC CGCCGCACTC AAGAGCGGCG ACGACCTCAA CTGCGGCAAC
ACCTATCGCG ACCTCAACCA AGCCATCGCG CGCGGCGACA TTGATGAATC AACACTGGAC
CAGGCACTCA TCCGCCTCTT CACCGCACGC CAGCGCCTGG GTACGCTGCA ACCACGCGAG
CACGACCCCT ATGCCGCCAT CGGCATCAAG CACATCGATA CCCCAGCGCA CCGCGCCCTT
GCACTACAAG CGGCCGCCCA GTCACTCGTC CTCTTGAAAA ACTCCGGCAA CACACTCCCG
TTAACCCCCG GGACCACATT AGCAGTCCTC GGCCCGGACG CCGACTCACT CACCGCCCTG
GAAGCCAATT ACCAAGGCAC CTCCTCGACC CCAGTGACCC CACTGATCGG CCTACGGACC
CGTTTCGGCA CCGCCAAAGT CCACTATGCA CAAGGCGCCT CCCTGGCACC CGGTGTCCCA
AGCACCATCA CGGAAACCGC ACTGCGCAAC CACGGTCACC CCGGCCTGAA AGGGGAATAT
TTCGACACGA TTGACTTTTC CGGCCCACCG CACCTAGTGC GTCAAGATCG CATCATCGCC
TTCAACTGGG ACCACGTCGC ACCCGCACCA GGCATGAACC CCCACCGCTA CGCGGTGCGC
TGGACCGGCG AACTCCTCCC CCCCGGCCCC GGCACCTACA CCTTCGCCGT GCATGTCGCG
CGCTGCTTCG ACTGCAACGG CCACGACCCG GTACGCCTGT ACATCGACGA TCGCCAAATC
ATCCCCGACA ACGCCACAGC GGCCCAAGCG ACCACGGCAC CCCAGCAGAC AGATAACACA
CACCTTGAAG CAACCCTTCA CTTTACCGAT ACCCGCCCAC ACCACATCCG CCTGGACATG
GAACACCGTG GCGAAGACCA AGGCGTGCGT TTGGAATGGC TAGCCCCGGA AGCGCCACAA
CTGGCTGAAG CCGAACGTGC CGTCGCACAC GCCGATGCCA TCGTCGCCTT CGTCGGCCTC
TCCCCGGAGG TGGAAGGCGA AGAATTGCAC ATCGACACCC CCGGGTTCAG CGGCGGCGAC
CGCACCACGA TTGACCTGCC CGCCACCCAA GAAACCCTGC TGCAACATGT GAAGACCACA
GGCAAACCCC TGATCGTCGT CCTCATGAGC GGCAGCGCCG TTGCACTGAA TTGGGCACAA
CACCATGCCG ACGCCATCCT CGCCGCATGG TATCCCGGAC AATCCGGAGG CACCGCAATC
GCACAAGCCC TGGCCGGTGA CGTCAATCCC GGCGGCCGTC TGCCCATGAC CTTCTACCGC
TCGACCCAGG ACCTGCCCCC CTACATCAGC TACGACATGA CCGGACGCAC CTATCGCTAC
TTCAAAGGCC AACCGCTCTA TCCATTTGGC TACGGCCTGA GCTATACCCA ATTCGCCTAC
GAAGCACCGC AGCTCTCCAC CGCAACCCTG AAAGCAGGCG ACACCTTGAC CGTCACTGCC
CACGTTCGCA ATACCGGCAC CCGGGCCGGT GATGAAGTCG TGCAACTTTA TCTAGAACCC
CCGCACTCCC CACAGGCACC ACTGCGCAAC CTGGTCGGCT TCAAAAGAGT GACATTGCGC
CCTGGCGAAT CCCGCCTGCT GACCTTCACA CTAGACGCAC GGCAACTCAG CAGCGTGCAG
CAGACCGGGC AACGCAGCGT CGAAGCCGGT CACTACCACC TCTTTGTGGG CGGTGGCCAA
CCCAACACCG GCGCACCCGG CGGAACCGCT GCATTCTCAA TCATCGGCCG CGCCCTGCTC
CCGAAATAA
 
Protein sequence
MPLPIAAPLT LATALILLLA TTPTTAAPSP EQHAAALVAQ MTRQEKIAQT MNAAPAIPRL 
GIPAYDWWSE GLHGIARNGY ATVFPQAIGL AASWNTDLLQ HVGTVTSTEA RAKFNLTGGP
GKDHPRYAGL TLWSPNINIF RDPRWGRGME TYGEDPYLTS QLAVSFIRGL QGNIPDHPRT
IATPKHFAVH SGPEPGRHSF DVDVSAYDLE ATYTPAFRAA IVDGHAGSVM CAYNALHGTP
ACASDWLLNT RLRNDWGFNG FVVSDCDAIE DMTRFHFFRQ DNASASAAAL KSGDDLNCGN
TYRDLNQAIA RGDIDESTLD QALIRLFTAR QRLGTLQPRE HDPYAAIGIK HIDTPAHRAL
ALQAAAQSLV LLKNSGNTLP LTPGTTLAVL GPDADSLTAL EANYQGTSST PVTPLIGLRT
RFGTAKVHYA QGASLAPGVP STITETALRN HGHPGLKGEY FDTIDFSGPP HLVRQDRIIA
FNWDHVAPAP GMNPHRYAVR WTGELLPPGP GTYTFAVHVA RCFDCNGHDP VRLYIDDRQI
IPDNATAAQA TTAPQQTDNT HLEATLHFTD TRPHHIRLDM EHRGEDQGVR LEWLAPEAPQ
LAEAERAVAH ADAIVAFVGL SPEVEGEELH IDTPGFSGGD RTTIDLPATQ ETLLQHVKTT
GKPLIVVLMS GSAVALNWAQ HHADAILAAW YPGQSGGTAI AQALAGDVNP GGRLPMTFYR
STQDLPPYIS YDMTGRTYRY FKGQPLYPFG YGLSYTQFAY EAPQLSTATL KAGDTLTVTA
HVRNTGTRAG DEVVQLYLEP PHSPQAPLRN LVGFKRVTLR PGESRLLTFT LDARQLSSVQ
QTGQRSVEAG HYHLFVGGGQ PNTGAPGGTA AFSIIGRALL PK