Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2003 |
Symbol | |
ID | 6121087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2086827 |
End bp | 2089265 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641649955 |
Product | Beta-N-acetylhexosaminidase |
Protein accession | YP_001776503 |
Protein GI | 170731070 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00352357 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCCCA CCCCAGCCCG CCCAACGCAG GAACCCCCAT TACTGCGGGC ATTGCTCACC CTGTGCATTG CCGCACTGTC AACAACGAGC TTCGACACCA CCGCATCACA TCATAAAAAA TCACAACACC CATTACCCCC GAGAACTGCT TCCGGCCCAC CACTACCACC ACTGCCACTG ATCCCTGCAC CCGTTCAAAT ACAACGCGGT CACGGCCAAA TCCACATTGG CCCCCACACC CTGATTTCCA TCCCCCCCAA CGATACCGAC GCACAACACA GCGCCACCTA CCTAGCCACA CTGCTACAGC ACACCCGCAA CCTGACATTA CACATCCACA CCGAAACCAC CCCCACCCCA GACAGCATCC GCCTACAACG CGACCCACAA TCACCCGTCA CTCAGACAGA AGGCTACACC CTGCAAGCCC TCCCCAACCA AGGCATGCAT ATCACGGCAC GAGACGGAGC AGGACTGTTC TACGGCGCGA TCACTGCATG GCAACTACTG ACTGCCGACA GCAACCAAGG CCCAACCGAA ATCCCTACCG TCACCATTCA CGACTGGCCA CGCTTCAAAT GGCGCGGCCA ACTCCTTGAC GTCGCCCGTC ACTTCCACGA CGTAGACACC GTCAAACACG TGATTGACGC CATGGCACAA CACAAACTCA ACGTCCTGCA CCTACACCTC ACCGACGACC AAGGCTGGCG TATCGAAATC AAACGCTACC CCAAACTCAC TGCAATCGGC GCCGAACGCA TCCCACCGGG CGCCGGACGC CACGGCACCC CAGAACGCTA CGGCGGCTTC TACACCCAAG ATCAAATCCG CGAACTCGTT GCCTACGCCA CCGAACGACA GATCACCATC CTCCCCGAAA TCGACATGCC CGGCCATGCA CAAGCCGCCG TGGCAGCCTA CCCCGACATC ATCGGAGTCA CCAGCACCAC CCCACCCGTC AGCGTCGACT GGGGCGTCAA CCCCTACCTC TTCGGCACCA GCACACCCAG CCTGGACTTC ATCCGCAATG TACTCGACGA AGTACTCACC CTATTCCCCT CCCAGTACAT CCACATCGGC GGCGACGAAG CCGTTAAAGA TCAATGGGAA GCCTCACACA CCATCCGCGC CCAAATGCGC AAACTGGGCG TGAAAGACAC ACATGCCATG CAAGGCTGGC TCAACACACA ACTAGCCCAA TACCTCACAA CACATGACCG ACGCCTGATC GGCTGGGATG AAATCATCCA AAGTGGCCTA CCAGAGAGCG CCTCCGTGAT GTCATGGCGC GGCGTCGAAG GCGCCATTAC CGCCGCACAA CAAGGACACG ACGTCGTCCT CGCCCCCGCT GGCTGGATGT ACCTAGACAA CCTGCAAACC GAACGCAGCG ACGAACCAAA CGGCCGCCTC GCCACCCTGC CCCTCTCCCG CGTCTACACA CTGGACCCCG TCCCCAAAGA ACTGACCCCC GACCAAGCCA TCCACATCCT GGGCCTACAA AGCGCCCTGT GGAGCGAATA CATCCCCTCA CGCTGGCACA TCGACCACGC CCTATTCCCA CGCCTCGCCG CCGTCGCCGA AGTCGCCTGG TCCCCCATGA CCGCACGCAA CTGGGACAAC TTCCTCAAAC GCCTCCCCCC ACAACTACAC CGCTACCGCA CCCTGCACAT CGACTACAGC GACGGCGCAT TCGCCCCCGA CATCATGCTG CAACACCGCT CAGCCTACGT CCTTGCTGGC GAACCCCCTC ACATCACACT CAGCAACCAA ACCAACACCG GCCAAATTCA CTACACCACA AACGGCAACG AACCGACCCT ACATTCCCCC CGCTACACCG CCCCATTTCC CATCACCCTC CCCACCACAG TCAAAGCAGC CGTATTCACC GAAGACGGCC GCCCCCTGGC CGCCACCCGC AGCCGCACCT TCGACCACAA CACACTGCTG AGTGTGGACA CCCAAGAATT ACGCAACTGC TCCGACAAAG GACCACTGGG ATTACGCCTC CCCCTGCTAC CAGACATGCC CGACCCCAAC ACCCCCGTGT ACAACGTCGA CCTATTCCAC GCCTGCTGGA TCGTCCCCCA AATACGCCTC AACAACATAC AAGCCATCCA CATCGACGCC GCACGCCTAG CACGCAACTA CGGCCTGGCC CACGACCAAT CCAAAGTCAT TCAATATCCC AAACACACCG CACACGGCGA ACTGGAAATC CGCACCGACT GCAACAAAAA ACCACTGGCC GTGATCCCCC TCCCGCCCGG AGACACCATC GGCGAACCAT TCACCCTCGA CGCCCCATTA CCACCGAACA TCGGCGTCCA CGACCTGTGC CTACGCATCA CCGCCCCCAT CCACGGCCCA CTGTATGCCA TTGGTCGCGT CCAACTGATC CACGACACCC CCGCATCACC TCCGCCCCCC ACACACTGA
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Protein sequence | MPPTPARPTQ EPPLLRALLT LCIAALSTTS FDTTASHHKK SQHPLPPRTA SGPPLPPLPL IPAPVQIQRG HGQIHIGPHT LISIPPNDTD AQHSATYLAT LLQHTRNLTL HIHTETTPTP DSIRLQRDPQ SPVTQTEGYT LQALPNQGMH ITARDGAGLF YGAITAWQLL TADSNQGPTE IPTVTIHDWP RFKWRGQLLD VARHFHDVDT VKHVIDAMAQ HKLNVLHLHL TDDQGWRIEI KRYPKLTAIG AERIPPGAGR HGTPERYGGF YTQDQIRELV AYATERQITI LPEIDMPGHA QAAVAAYPDI IGVTSTTPPV SVDWGVNPYL FGTSTPSLDF IRNVLDEVLT LFPSQYIHIG GDEAVKDQWE ASHTIRAQMR KLGVKDTHAM QGWLNTQLAQ YLTTHDRRLI GWDEIIQSGL PESASVMSWR GVEGAITAAQ QGHDVVLAPA GWMYLDNLQT ERSDEPNGRL ATLPLSRVYT LDPVPKELTP DQAIHILGLQ SALWSEYIPS RWHIDHALFP RLAAVAEVAW SPMTARNWDN FLKRLPPQLH RYRTLHIDYS DGAFAPDIML QHRSAYVLAG EPPHITLSNQ TNTGQIHYTT NGNEPTLHSP RYTAPFPITL PTTVKAAVFT EDGRPLAATR SRTFDHNTLL SVDTQELRNC SDKGPLGLRL PLLPDMPDPN TPVYNVDLFH ACWIVPQIRL NNIQAIHIDA ARLARNYGLA HDQSKVIQYP KHTAHGELEI RTDCNKKPLA VIPLPPGDTI GEPFTLDAPL PPNIGVHDLC LRITAPIHGP LYAIGRVQLI HDTPASPPPP TH
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