Gene Xfasm12_1994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1994 
Symbol 
ID6121077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand+ 
Start bp2077735 
End bp2078349 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content54% 
IMG OID641649945 
Productlipoprotein 
Protein accessionYP_001776494 
Protein GI170731061 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAT TCGGTCCTTT GTACAACCGC GCAATCACCT GGTCACGTCA TCGTTATGCC 
CCCGCACTCC TCACAGGACT GAGTTTCGTC GAAGGGTTCA TCTTTCCCGT CCCGCCAGAA 
GTGATGCTGG GACCGATGTC GCTCGCCAAC CGACATCAAG CACTGTGGTT CGCCACACTG 
AGTCTACTCG GCTCACTCGC TGGCGCACTA CTGGGTTACT TACTCGGCCA CTTCGCATTT 
GCAGTAATGC AACCACTGAT CGCATGGTTG GGCTGGAGCC AAGCCATCGA TAAGCAAATA 
CACCAACTGC AACAGCTCGT CCTCGAATCG CCATGGCGCG CGTTTTGGCT GCTCGTGTTG 
GTCGGCTTCA CCCCGATCCC ATTAAAAATA TTCACCTGGA CATCGGGCAT CGTCGGTGTA 
CCTTTACTGC CGTTCTTGAG CAGCATGCTG ATCGGCCGCG GCAAGCGAGT CTACTTAGTC 
GCTGGCGCAA TCAAACTTGG CGGCAAACGC GCAGAAACCC TACTGCATCG ATGGATTGAA 
CCCCTTGGCT GGATCACCAG CGCGCTTCTG ATCGGTCTGG TTGGCTGGGT TATCTGGAAA 
ACCAAATTTG GATAA
 
Protein sequence
MKIFGPLYNR AITWSRHRYA PALLTGLSFV EGFIFPVPPE VMLGPMSLAN RHQALWFATL 
SLLGSLAGAL LGYLLGHFAF AVMQPLIAWL GWSQAIDKQI HQLQQLVLES PWRAFWLLVL 
VGFTPIPLKI FTWTSGIVGV PLLPFLSSML IGRGKRVYLV AGAIKLGGKR AETLLHRWIE 
PLGWITSALL IGLVGWVIWK TKFG