Gene Xfasm12_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1983 
Symbol 
ID6121066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2069775 
End bp2070677 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content55% 
IMG OID641649934 
Productcobalt-zinc-cadmium resistance protein 
Protein accessionYP_001776483 
Protein GI170731050 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.644974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACACG ACCACACGCA TGTACCGAAG GGGATGCATC ACGAGCGCCC CTTGTGGTGG 
GCGCTTGGGC TTACGGCGAG TGTCCTAGTG GCCGAAATTA TTGGTGCGGT GCTGACACGT
AGTTTGGCGC TGTTGTCTGA TGCGGTGCAC ATGGCTACCG ACGTGTTCGC GTTAATGATT
GCATTGGTCG CGGTGCGTCT GAGTCGGCGT CCGCCTGATG TGCGTCGTAC CTATGGTTAT
GCACGGTTAG AGGCGTTTGG TGCGTTGGTT AACGGGGTAT TGTTGTTTGG CGTCGGTGGT
TACATTTTGT GGGAGGCTGT GCAGCGCTTG CGCGCTCCGC AGGAGATTGT GTCCAGCGGT
ATGCTGGTTA TTGCCGTCTT GGGTTTGGTC ATCAATCTGA TCGTAATGCG TTTGTTGCAT
GCCGGTCGTG GTGAGAACCT CAGTATGAAG GGGGCTTACC TTGAGGTGTG GAGCGATATG
CTCGGTTCGG TCGCTGTCAT CGTTGCTGCG ATGGTGATCT ATGTGACCCG TTGGTATTGG
GTGGATTCGG TATTGGCTGC GTTGATTGGG CTATGGGTTT TGCCGCGAAC CTGGCTGCTA
TTAAGTGAGG CTGTCAATGT GTTGTTGGAA GGGGTGCCGA AGGGGTTTGC GTTGCCACCC
ATACGTGATG CGCTTAGTGA TCATCCTGGT GTGGCCAATG TCCATGATGT GCATCTGTGG
GCATTAGGGT CCAGGCAGCC GTTGCTGACG GCGCATGTGG TGGCAATCCA AGGCACTGCA
CCGGATGCGT TGCGTCGCAC ATTGCAGGAG TTGCTGCATG AGCGCTTTAG TATTGAGCAT
GTGACGTTGC AAATTGAGAT CGAGCATTGT GGGAGTGATG CTTGTGACGC GAAGCGTTCA
TAG
 
Protein sequence
MGHDHTHVPK GMHHERPLWW ALGLTASVLV AEIIGAVLTR SLALLSDAVH MATDVFALMI 
ALVAVRLSRR PPDVRRTYGY ARLEAFGALV NGVLLFGVGG YILWEAVQRL RAPQEIVSSG
MLVIAVLGLV INLIVMRLLH AGRGENLSMK GAYLEVWSDM LGSVAVIVAA MVIYVTRWYW
VDSVLAALIG LWVLPRTWLL LSEAVNVLLE GVPKGFALPP IRDALSDHPG VANVHDVHLW
ALGSRQPLLT AHVVAIQGTA PDALRRTLQE LLHERFSIEH VTLQIEIEHC GSDACDAKRS