Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1981 |
Symbol | |
ID | 6121064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2067226 |
End bp | 2069037 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641649932 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001776481 |
Protein GI | 170731048 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.01171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGTGA TTGAAATCAA AGTTCCCGAT ATCGGCGATT ACAGCAAGGT CCCAGTCATC GAAGTGCTGG TTACCGTTGG CGACCACGTG GTCAAAAACC AAGGGATCCT CACACTAGAA TCAGACAAAG CCACCTTGGA AGTCCCATCG ATGAATAATG GCGTTGTCAA AGAACTGAAA GTCAACGTCG GCGATTTGCT TTCACAAGGC GACGTGATCC TCCTGCTGGA GACCGAAGAC ACCACCGCCC CCCCCTCACC AAGCAACGCG GCGACATCCG ACACCACCTC ACCGCCCCCG CCATCCCCCC AACCAGCCGC TTCCAAGCCG ACAGCACCAG ATCAACAACA CTCCGACATC AAGTGCCGCA TGGTCGTACT CGGTGCCGGT CCCGGTGGCT ACACCGCAGC ATTCCGCGCC GCTGACCTCG GCTTGGATAC AGTGCTCGTT GAACGCTATC CCAACCTAGG TGGCGTCTGC CTCAATGTCG GCTGCATTCC TTCCAAAGCA TTACTGCACG CAGCCGCCGT CATCGACGAA GCTGCACATG CTAGCACCTT TGGAATTGAT TTTGGCAAAC CAAAAATCAC CCTAGACACA CTGCGCGAAT ACAAACAAAA CGTAGTCAAC AAACTGACTG TCGGCTTGGC CGTGATGGCC AAACAACGCA AGGTACGCAC CGTCACCGGC ATCGCGCACT TCGTCTCTCC CAACACACTG GACATTACCG CTGCTGACGG CAGCACCCAA CGACTCCATT TCCAACAATG CATCATTGCT ACCGGCTCAC ACCCAGTGAA GCTACCAAAC TTCCCTTGGG ACGACCCGCG CATCATGGAC TCCACTGACG CACTGGAACT GGCCGAAGTG CCAAAAAAAC TGCTTGTCGT TGGTGGCGGC ATCATCGGCC TAGAAATGGC TACCGTGTAC AACGCCCTGG GCAGCCACGT CACCATTGTC GAATTCATGG ATCAGATCAT CCCCGGCACC GACAAAGATC TAGTGAAGCC ACTGGCGGAC CGCATGAAAA AACAGGGCAT TGAAATACAC CTGAACACCA AAGCAAGCCA CGTCAAAGCC GACAAAAAAG GCATCACCGT CTCATTCGAA GCACCCACCC AAGGCACACA ACCCGCATTA AAAACATCGA CCTATGATCG CGTCCTTGTT GCCGTCGGCC GTACACCGAC AGGCAACAAC ATCAGCGCTG AAAAAGCAGG CGTCAACGTC ACCGAACGCG GCTTCATCCC GGTTGATCGC CAAATGCGCA GCAACGTACC CCATATCTTT GCCATTGGAG ACATTGTTGG TAACCCAATG CTGGCGCACA AAGCCACACA TGAAGGCAAA CTGGCTGCCG AAGTCGCCGC TGCTGAAACA GAATCAGGCA AACATCGGGA ATGGGTTGCC CGCGTGATCC CATCCGTGGC CTACACCAAC CCGGAAATTG CCTGGATCGG TATGACTGAA ACCGAAGCCA AAGCGAAAGG ACTCAACATC GGCGTCGCCA AATTCCCCTG GGTTGCCAGC GGTCGCGCCA TAGGCATCGG ACGCACTGAA GGCTTCACTA AACTCATCTT CGACGAAGAC ACACACCGCA TCATTGGCGG AGCGATCGTC GGCGTCCACG CAGGCGACCT CTTGGCTGAA ATCGGACTCG CCATCGAAAT GGGTGCCGAA GCCGAAGACA TCAGCCACAC AATCCACGCA CACCCCACAT TGAGCGAATC GATTGCCATG AGCGCCGAAG TCTACGACGG CACCATCACC GACTTGTATC TCCCCAAAAA ATCCGCCACT TCAGCAAAGT AA
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Protein sequence | MTVIEIKVPD IGDYSKVPVI EVLVTVGDHV VKNQGILTLE SDKATLEVPS MNNGVVKELK VNVGDLLSQG DVILLLETED TTAPPSPSNA ATSDTTSPPP PSPQPAASKP TAPDQQHSDI KCRMVVLGAG PGGYTAAFRA ADLGLDTVLV ERYPNLGGVC LNVGCIPSKA LLHAAAVIDE AAHASTFGID FGKPKITLDT LREYKQNVVN KLTVGLAVMA KQRKVRTVTG IAHFVSPNTL DITAADGSTQ RLHFQQCIIA TGSHPVKLPN FPWDDPRIMD STDALELAEV PKKLLVVGGG IIGLEMATVY NALGSHVTIV EFMDQIIPGT DKDLVKPLAD RMKKQGIEIH LNTKASHVKA DKKGITVSFE APTQGTQPAL KTSTYDRVLV AVGRTPTGNN ISAEKAGVNV TERGFIPVDR QMRSNVPHIF AIGDIVGNPM LAHKATHEGK LAAEVAAAET ESGKHREWVA RVIPSVAYTN PEIAWIGMTE TEAKAKGLNI GVAKFPWVAS GRAIGIGRTE GFTKLIFDED THRIIGGAIV GVHAGDLLAE IGLAIEMGAE AEDISHTIHA HPTLSESIAM SAEVYDGTIT DLYLPKKSAT SAK
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