Gene Xfasm12_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1981 
Symbol 
ID6121064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2067226 
End bp2069037 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content55% 
IMG OID641649932 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001776481 
Protein GI170731048 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.01171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTGA TTGAAATCAA AGTTCCCGAT ATCGGCGATT ACAGCAAGGT CCCAGTCATC 
GAAGTGCTGG TTACCGTTGG CGACCACGTG GTCAAAAACC AAGGGATCCT CACACTAGAA
TCAGACAAAG CCACCTTGGA AGTCCCATCG ATGAATAATG GCGTTGTCAA AGAACTGAAA
GTCAACGTCG GCGATTTGCT TTCACAAGGC GACGTGATCC TCCTGCTGGA GACCGAAGAC
ACCACCGCCC CCCCCTCACC AAGCAACGCG GCGACATCCG ACACCACCTC ACCGCCCCCG
CCATCCCCCC AACCAGCCGC TTCCAAGCCG ACAGCACCAG ATCAACAACA CTCCGACATC
AAGTGCCGCA TGGTCGTACT CGGTGCCGGT CCCGGTGGCT ACACCGCAGC ATTCCGCGCC
GCTGACCTCG GCTTGGATAC AGTGCTCGTT GAACGCTATC CCAACCTAGG TGGCGTCTGC
CTCAATGTCG GCTGCATTCC TTCCAAAGCA TTACTGCACG CAGCCGCCGT CATCGACGAA
GCTGCACATG CTAGCACCTT TGGAATTGAT TTTGGCAAAC CAAAAATCAC CCTAGACACA
CTGCGCGAAT ACAAACAAAA CGTAGTCAAC AAACTGACTG TCGGCTTGGC CGTGATGGCC
AAACAACGCA AGGTACGCAC CGTCACCGGC ATCGCGCACT TCGTCTCTCC CAACACACTG
GACATTACCG CTGCTGACGG CAGCACCCAA CGACTCCATT TCCAACAATG CATCATTGCT
ACCGGCTCAC ACCCAGTGAA GCTACCAAAC TTCCCTTGGG ACGACCCGCG CATCATGGAC
TCCACTGACG CACTGGAACT GGCCGAAGTG CCAAAAAAAC TGCTTGTCGT TGGTGGCGGC
ATCATCGGCC TAGAAATGGC TACCGTGTAC AACGCCCTGG GCAGCCACGT CACCATTGTC
GAATTCATGG ATCAGATCAT CCCCGGCACC GACAAAGATC TAGTGAAGCC ACTGGCGGAC
CGCATGAAAA AACAGGGCAT TGAAATACAC CTGAACACCA AAGCAAGCCA CGTCAAAGCC
GACAAAAAAG GCATCACCGT CTCATTCGAA GCACCCACCC AAGGCACACA ACCCGCATTA
AAAACATCGA CCTATGATCG CGTCCTTGTT GCCGTCGGCC GTACACCGAC AGGCAACAAC
ATCAGCGCTG AAAAAGCAGG CGTCAACGTC ACCGAACGCG GCTTCATCCC GGTTGATCGC
CAAATGCGCA GCAACGTACC CCATATCTTT GCCATTGGAG ACATTGTTGG TAACCCAATG
CTGGCGCACA AAGCCACACA TGAAGGCAAA CTGGCTGCCG AAGTCGCCGC TGCTGAAACA
GAATCAGGCA AACATCGGGA ATGGGTTGCC CGCGTGATCC CATCCGTGGC CTACACCAAC
CCGGAAATTG CCTGGATCGG TATGACTGAA ACCGAAGCCA AAGCGAAAGG ACTCAACATC
GGCGTCGCCA AATTCCCCTG GGTTGCCAGC GGTCGCGCCA TAGGCATCGG ACGCACTGAA
GGCTTCACTA AACTCATCTT CGACGAAGAC ACACACCGCA TCATTGGCGG AGCGATCGTC
GGCGTCCACG CAGGCGACCT CTTGGCTGAA ATCGGACTCG CCATCGAAAT GGGTGCCGAA
GCCGAAGACA TCAGCCACAC AATCCACGCA CACCCCACAT TGAGCGAATC GATTGCCATG
AGCGCCGAAG TCTACGACGG CACCATCACC GACTTGTATC TCCCCAAAAA ATCCGCCACT
TCAGCAAAGT AA
 
Protein sequence
MTVIEIKVPD IGDYSKVPVI EVLVTVGDHV VKNQGILTLE SDKATLEVPS MNNGVVKELK 
VNVGDLLSQG DVILLLETED TTAPPSPSNA ATSDTTSPPP PSPQPAASKP TAPDQQHSDI
KCRMVVLGAG PGGYTAAFRA ADLGLDTVLV ERYPNLGGVC LNVGCIPSKA LLHAAAVIDE
AAHASTFGID FGKPKITLDT LREYKQNVVN KLTVGLAVMA KQRKVRTVTG IAHFVSPNTL
DITAADGSTQ RLHFQQCIIA TGSHPVKLPN FPWDDPRIMD STDALELAEV PKKLLVVGGG
IIGLEMATVY NALGSHVTIV EFMDQIIPGT DKDLVKPLAD RMKKQGIEIH LNTKASHVKA
DKKGITVSFE APTQGTQPAL KTSTYDRVLV AVGRTPTGNN ISAEKAGVNV TERGFIPVDR
QMRSNVPHIF AIGDIVGNPM LAHKATHEGK LAAEVAAAET ESGKHREWVA RVIPSVAYTN
PEIAWIGMTE TEAKAKGLNI GVAKFPWVAS GRAIGIGRTE GFTKLIFDED THRIIGGAIV
GVHAGDLLAE IGLAIEMGAE AEDISHTIHA HPTLSESIAM SAEVYDGTIT DLYLPKKSAT
SAK