| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1980 |
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| Symbol | |
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| ID | 6121063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 2065525 |
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| End bp | 2067180 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641649931 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_001776480 |
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| Protein GI | 170731047 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000318047 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAA TCAAGGAAGC TTTTGTCCCC GATATCGGTG ACTACAGCAA CGTCCCAGTG
ATTGAAGTGC TAGTCGCTGT TGGCGATACC GTCTCCAAGG GCCAAAGTTT GATCACCTTG
GAATCTGACA AAGCAACCAT GGAAGTACCC TCGTCAACGA CCGGTATCAT CAAAGAAATA
AAAGTGAAGG TTGGCGATAC CTTATCCCAA GGCCATGTCG TCGCATTAAT CGAAGTCTCC
GAAGAGACTG CCGAAATCAC CACACCCATG ACCGTTAACA CGCCAACCAC GCGTGCTCAC
AACACTGCAC CTCCAGAAGA CGGAGGCAGC TTAATCGAAG TGCGTGTCCC TGATATTGGC
GATTACACCA ACGTCCCAGT GATTGAAGTC CTGGTGGCTG TTGGCGATAC CGTCTCCAAA
GACCAAAGTC TAATCACCTT AGAATCTGAC AAAGCAACCT TGGAAGTACC CTCCTCCGCC
ACAGGTGTCA TCAAACAACT TAAGGTCAAC ATTGGAGACA CCTTGTCGCA AGGCGACATC
GTCGTTGTGC TTCAAAGCGC AGAGAGCATC CCACTCACTC CAGCCACAAA CAAACCAGCA
TTGCCACCCA ATTCCAGCCC TGCACGCGAT GCCATCTCCG CCCCAGCATC CCCTGCAGGG
ACACCGAGCA CCCCACCGAT TACCTTCGAT GCCAACACCG TGCTACCGTC CAAGGTCCCC
TATGCCAGCC CCGCAGTACG CCTGCTTGCA CGCCAGTTAG ACGTGGACCT GAGCCGCATC
AAAGGCAGCG AGAAAAATGG ACGCATTACC CGCGAAGACG TACAGAAATT CGTCAACGCC
ACCTTAGGTA CTGGTATGGC TGAAGGCAGA ACACCCTCCG CTTCAATCAC CACAAATGGT
GGCCTCAACT TACTCCCTTG GCCAAATGTG GATTTCAGCA AATTCGGCGA AATTGAAACC
CAGCCTTTAT CTCGGATCAA AAAGATTTCC GGTGCCAATC TTGCCCGCAA TTGGGCGATG
ATCCCGCACG TCACCCAATT CGATCAGGCC GACATCACCC AACTGGAGGC CCTGCGCGTA
CAAATCAATA AAGAGAATGC CGCATCCAAC AAGAACGGAA CCGGCATTAA ACTGACTGTT
CTGGCTTTCC TTATCAAAGC AAGCGCCGCA GCACTGAAAA AATTTCCAAC ATTCAACGCC
TCCCTTGATG CCACTGGCGA AACGCTCACA CTCAAAAAAT ACTTCCATAT CGGTTTCGCC
GCCGACACAC CAAACGGACT CGTCGTCCCG GTGATCCGCA ACGTAGACCA AAAAGGCATC
GTAGAGATCG CACAAGAAAC CAGCGATCTC GCCAAAAAAG CACGCGATGG CAAACTCACC
CCAGCAGACA TGAGCGGTGG TTGCTTCTCC ATCAGCTCAC TCGGTGGCAT CGGAGGTACC
GCATTCACAC CCATTATCAA CGCACCTGAA GTAGCGATCC TGGGTGTCTC CAAATCCCTC
ATCCAACCCA TCTGGGATGG CACACAATTC GCACCTAAAA TGCTGTTGCC GCTGTCACTG
AGCTACGATC ACCGCGTCAT TGATGGTGCC TTGGCCGCAC ACTTCACCAC TTATCTCAGC
CAGATACTCG CCGACATGCG GCGCGTACTG CTGTGA
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| Protein sequence | MTEIKEAFVP DIGDYSNVPV IEVLVAVGDT VSKGQSLITL ESDKATMEVP SSTTGIIKEI
KVKVGDTLSQ GHVVALIEVS EETAEITTPM TVNTPTTRAH NTAPPEDGGS LIEVRVPDIG
DYTNVPVIEV LVAVGDTVSK DQSLITLESD KATLEVPSSA TGVIKQLKVN IGDTLSQGDI
VVVLQSAESI PLTPATNKPA LPPNSSPARD AISAPASPAG TPSTPPITFD ANTVLPSKVP
YASPAVRLLA RQLDVDLSRI KGSEKNGRIT REDVQKFVNA TLGTGMAEGR TPSASITTNG
GLNLLPWPNV DFSKFGEIET QPLSRIKKIS GANLARNWAM IPHVTQFDQA DITQLEALRV
QINKENAASN KNGTGIKLTV LAFLIKASAA ALKKFPTFNA SLDATGETLT LKKYFHIGFA
ADTPNGLVVP VIRNVDQKGI VEIAQETSDL AKKARDGKLT PADMSGGCFS ISSLGGIGGT
AFTPIINAPE VAILGVSKSL IQPIWDGTQF APKMLLPLSL SYDHRVIDGA LAAHFTTYLS
QILADMRRVL L
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