Gene Xfasm12_1977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1977 
Symbol 
ID6121060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand- 
Start bp2063989 
End bp2064645 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content49% 
IMG OID641649928 
Productouter membrane protein 
Protein accessionYP_001776477 
Protein GI170731044 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000000671005 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAA TTTCACTGAT TGGCCTAGCT ACTATGAGTA TGCTGGCCTT TAACACCTCA 
GCCTTTGCGT TGGGCGCGGC TTCTTCCAAC AGTGGTGCCT CCGGCAAGCA TTGGTCAGTG 
GTTGGCGGCG CCGCCCTCGT GCAACCAAAG AATGGGAAAA ATGCAGCACA GAATACTGTC 
AAGTTTGGTG GCGATGTTGC ACCAACGCTA AGTGTAACCT ACTACATCAA CGATAATGTG 
GGATTCGAGC TGTGGGGCAT TACTAAAAAG TTGAGTTATA CCGCAAAGAC TGACGCATCG 
GGCAAGATCG GCAATGTGAC TCAAAAGACA CCGTTAGCGT TGAGTGCGCA GTATCACTTT 
GGTCAGGCGC AAAACGTGTT CCGTCCGTTT GTTGGTCTTG GTTACTCTCA AGCTAAGTCT 
AGATTTACTG CTCTGGGATC TACTGATCGT GTGAGTCTTG GCAATTTCCG CGGTGCAATC 
GGCACGATTG GTTTAGATAT GAATGTTGAT TCAAATTGGT TTGCTCGTCT TGATGCGCGT 
TATACGCGTT TCAGTAATAG CAATAGCAAG GCGGCTCTGT CTTCAAGTTT GGGTCTCGAT 
CAGAACCGGA GACTGGATCC GTGGTCCGTG GGTTTCGGCA TCGGCGCGCG TTTCTGA
 
Protein sequence
MRKISLIGLA TMSMLAFNTS AFALGAASSN SGASGKHWSV VGGAALVQPK NGKNAAQNTV 
KFGGDVAPTL SVTYYINDNV GFELWGITKK LSYTAKTDAS GKIGNVTQKT PLALSAQYHF 
GQAQNVFRPF VGLGYSQAKS RFTALGSTDR VSLGNFRGAI GTIGLDMNVD SNWFARLDAR 
YTRFSNSNSK AALSSSLGLD QNRRLDPWSV GFGIGARF