Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1971 |
Symbol | |
ID | 6121054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2059247 |
End bp | 2059966 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641649924 |
Product | putative xylanase/chitin deacetylase |
Protein accession | YP_001776473 |
Protein GI | 170731040 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0644502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTATCC CAATTCTGAT GTATCACAAC ATTGCGAAAG TGACGAAGCA GGTGCGACAT CTGCGCGGAT TGTATGTGAC GCCGACGGCA TTCGCGCGCC AGATGTGGCT ACTTCACCGG CTTGGCTATT GCTGTCTGTC GATGTCCGCC GCGATGCCGT ATCTCCGTGG TGAGCGTTCA GGAAAGGTCA TGGTGGTGAC CTTGGATGAT GGTTATCTGG ATAATCTGCA AGCGGCACTT CCGGTGCTTC AGGCGCACGG TTTCAGTGCA ACTTGTTACC TTGTCAGCGG TAGCCTCGCT CGCTTCAACA CGTGGGATGC GGAACGGCTC AAAGTGTGCA AACCGCTGAT GAGTCCTGCG CAAGTCCGTC AATGGCATGA CGCTGGGATG GAGGTGGGGG CGCATACACG TAGTCACCCG CATCTCAGTG GGTGTACAGC AGCGCAATTG CATGAAGAGA TCGCCGGTTG CCGCGATGAT TTGGAGCAGT GTATCGGTGC GCCGGTGACC CAATTCTGTT ATCCATACGG TGATGTGACA CCGCCGGTGA TCGATGCAGT CTGTGATGCC GGCTATGCTG CGGCGACCAC GACGCGGCGT GGTCGCGTTT TCCCCGGCCA ACATCTGTGG ACATTGCCGC GCGTACCGGT ATCGTACCGT CACATCCTCC CTCAGTTCGC GTTACGTACA TTGACTGGTT ATGAGGATCG TCGGGGATGA
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Protein sequence | MAIPILMYHN IAKVTKQVRH LRGLYVTPTA FARQMWLLHR LGYCCLSMSA AMPYLRGERS GKVMVVTLDD GYLDNLQAAL PVLQAHGFSA TCYLVSGSLA RFNTWDAERL KVCKPLMSPA QVRQWHDAGM EVGAHTRSHP HLSGCTAAQL HEEIAGCRDD LEQCIGAPVT QFCYPYGDVT PPVIDAVCDA GYAAATTTRR GRVFPGQHLW TLPRVPVSYR HILPQFALRT LTGYEDRRG
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