| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1970 |
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| Symbol | |
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| ID | 6121053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2058138 |
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| End bp | 2059250 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641649923 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_001776472 |
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| Protein GI | 170731039 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.622301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTGT TGTTTGTGGG AACGTCCCGT GGAGGTGGGG GGGCTGAGAG TCATTTTGTC
GGCCTGGTGC GCGCGATGGC TGAGACCAAT CACCAGAGTA CGGCGTTGGT TCATCCGGAT
GGATTGATCG CACGTCAGTT GCAACAGACG GCGATACGGC TGTTTACTGC CACGTTCCGT
AACGTGATGG ATCTACGTGG CTACCTAGCG ATTGCGCGTG CGCTGCGTCT TGTTCATCCC
GATGTGTTGG TGGGTGACTT TGGTAAAGAG TATTGGCCTT TGTTGTTGAT GGGACGCCTT
TACCGCTTGC CGGTGGTGCT GTTCCGGCAT CGCTTGCCAC CGATGAATCG TTTTTCGACC
TATTGGGTGC CTCGCTTGGC AGATCGATTC TTCGCGGTCT CTGCTTACGC GCGCCGCCAC
TATTTGGCTG AAGGGATGCC GCCAGAACGG GTACAGGTGT TGTATAACCC GGTGGATACT
GACGCGTTAC GTCCCGATCC AAGATTGCGT AGAGCAATGT TGCATGAGTT GGGTTGGGAT
GAGGATGTCC TTGTGGTGGG GTGCTTCGGA CGGATCCACG AAGGGAAGGG GGTGTTCGTC
CTTGCTGAAG CAATGGAGCA GGCGATGCAG GAGGAGCCGC GTTTGTGCTG TTTATGGATG
GGTACAGGAC TGCACGTGCA GCGCTTGACA GCCACCGTTG CCGACAGCCG ATTCGCATCG
CGGCAGCGTG TGTTGGGTTG GGTGACTGAT CCGGCGCGTT ATTTCCAGGC GTTGGCGATG
CTGGCGATGC CTTCTTTGTC GCCGGAGACG TTTGGACGTG TCTCCGCAGA GGCGCAAGCA
TCCGGTGTGC CTGTGCTTGT GAGTGATGTG GGTGGGGCTG CGGAGACATT GCAGGATGGT
ACGACCGGGA TGCTGCTGCC CGCCGGGGAC GTGCCTGCGT GGCGGAATGC GATTCTGGCA
TTTTGTGATC CGCAACTCCG GGCCGCGATG GCGGCAGCAG CGCCGAGTTT TGTAGAGGCA
CGTTTCAGTC AGCGGGTGAT CGCAGCGGAA TTTATCAGTG AACTGGAGCG TGTGATTTCA
GATCGTCATC ACATGATTGC ACCAATGCGC TGA
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| Protein sequence | MKVLFVGTSR GGGGAESHFV GLVRAMAETN HQSTALVHPD GLIARQLQQT AIRLFTATFR
NVMDLRGYLA IARALRLVHP DVLVGDFGKE YWPLLLMGRL YRLPVVLFRH RLPPMNRFST
YWVPRLADRF FAVSAYARRH YLAEGMPPER VQVLYNPVDT DALRPDPRLR RAMLHELGWD
EDVLVVGCFG RIHEGKGVFV LAEAMEQAMQ EEPRLCCLWM GTGLHVQRLT ATVADSRFAS
RQRVLGWVTD PARYFQALAM LAMPSLSPET FGRVSAEAQA SGVPVLVSDV GGAAETLQDG
TTGMLLPAGD VPAWRNAILA FCDPQLRAAM AAAAPSFVEA RFSQRVIAAE FISELERVIS
DRHHMIAPMR
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