Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1944 |
Symbol | |
ID | 6120224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 2021252 |
End bp | 2022544 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641649898 |
Product | ubiquinol cytochrome C oxidoreductase, cytochrome B subunit |
Protein accession | YP_001776447 |
Protein GI | 170731014 |
COG category | [C] Energy production and conversion |
COG ID | [COG1290] Cytochrome b subunit of the bc complex |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0553456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCATCG GGCAGGGGAC GTTTGAATTC ATGAGCAACA TCATTGCTCG TGGTGTCCGA GGGGTGGTGG ATTGGGTCGG TGCGCGTGTT CCGGGATTAG TGTTGTTTTA TAGGAATCAC TTCACGGAGT ACTACGTACC TAAAAATCTC AATGTCTGGT ATTGCTTCGG GTCGCTATTA CTGGTGGTGT TGGTGAATCA GGTCGTCACT GGCTTCTTTC TTGTGATGCA TTACAAGCCC AGTGTTGCGG AGGCGTTCCA GTCGATCGAA ATGACGATTA TGCGGGACGT TGAGTGGGGC TGGTTGATTC GTTATATGCA CAGTACGGGT GCTTCGTTGT TTTTCATCGG GGTATATCTG CACATGTTCC GTGGGTTGAT CTATGGCAGT GGAAAGAAAC CACGTGAATT AGTTTGGGTG TTGGGTATGT TGATGTATGT GGTACTGATG GTTGAGGCAT TCGTGGGGTA CGTGTTGCCG TGGGGGCAGG TGTCGTTCTG GGGGGCGAAG GTGATTATTT CGCTGTTCGG TGTGATCCCA GTGATCGGCA ATGGTCTGGA TGAGTGGATC ATGGGCGATT ATTTGCCGTC CGATGTGACG CTCAGTCGTT TCTTTGCATT GCACGTGATT GCGTTGCCGC TGTTGTTGGG ATTTTTGCTG GTGCTGCATT TGGTTGCGTT ACGCGGGGTT GGTTCCAACA ATCCGGATGG TATTGACATC CATCAGGGCC CTAAAGGAAA TCGTTGGGAT TCTATGCAGT CAGCTGACAG TATCCCGTTC CATCCGTATT ACACGCTTAA GGAGATGGTG GCGGTTTGTG TCCTATTGTT GTTAGCGGCC TTCGTGATTT TTTTCGCTCC GGAGTTTGGC GGTTTGTTTT TGGAGTACGG CAATTTTGTT GAAGCGAATC CCCTGGTGAC TCCTGAGGAT ATGAAGCCGG TTTGGTATTT TGCGCCGTAT TATGCGATGT TGCGTTTGGT ACCTGGTAAA TCGGTTGGTG TGTTAGTGAT GTTTTCTGCG ATCGCTATTT TGTTTCTGGT GCCCTGGTTG GATCGCGGCA AGGTGTATTC GATTCGTTAT CGTGGCTGGA TTGCACGGAT AGCATTCGGT GTGTTTGTAG TTTGTTTTGT GTGGCTTGCG GTGATTGGGT TGGGGCCAGG TAAGGCTGTT TGGGAAATCT ATGTTGGGCG GGTGCTGATT TTTTTGTATT TCGCATTTTT CATCACTATG CCATTGTGGA CGGTAGTGGC TTCTATGAAG CCGGTTCCAG AACGACTGAC TTCCCATGGC TGA
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Protein sequence | MSIGQGTFEF MSNIIARGVR GVVDWVGARV PGLVLFYRNH FTEYYVPKNL NVWYCFGSLL LVVLVNQVVT GFFLVMHYKP SVAEAFQSIE MTIMRDVEWG WLIRYMHSTG ASLFFIGVYL HMFRGLIYGS GKKPRELVWV LGMLMYVVLM VEAFVGYVLP WGQVSFWGAK VIISLFGVIP VIGNGLDEWI MGDYLPSDVT LSRFFALHVI ALPLLLGFLL VLHLVALRGV GSNNPDGIDI HQGPKGNRWD SMQSADSIPF HPYYTLKEMV AVCVLLLLAA FVIFFAPEFG GLFLEYGNFV EANPLVTPED MKPVWYFAPY YAMLRLVPGK SVGVLVMFSA IAILFLVPWL DRGKVYSIRY RGWIARIAFG VFVVCFVWLA VIGLGPGKAV WEIYVGRVLI FLYFAFFITM PLWTVVASMK PVPERLTSHG
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