Gene Xfasm12_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1943 
Symbol 
ID6120223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp2020498 
End bp2021259 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content51% 
IMG OID641649897 
Productubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit 
Protein accessionYP_001776446 
Protein GI170731013 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.810872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT GGGGCAGGTT ACGGCGTTGT TTGTGTTGGA TACTGTGCTT GTTGTTGCCA 
TGTGTGCTGA TGTCCGCTGC ACAGGCGGTG GATGATGTCC CGTTGGAACA TGCTGGTAAT
GATGTGAGTG ATCGCATGTC GTTGCAGCGC GGTGTGCAGT TGTACATGAA TTATTGTGTG
GGCTGCCATT CGTTGAAGTA CCTACGTTAT TCACGTATCG CTGCTGATTT GGGTTTAAGT
GAAGTGCAGG TGATGAGTAC TCTCAATGTC ACCGGTGCCA AGTTTGGCGA TACGATCATG
ACAGGGATGC CGGTTGACAC TTCGGAGCAG TGGTTTGGTA AGATTCCGCC GGATTTGAGT
TTGGTGGCCC GCGTCCGTGG GAGTGATTGG ATCTACACTT ATCTGAGGTC TTTCTACGTC
GACTCGACTC GCCCGCTGGG TTGGAACAAT CGACTGTTTG TCAATGTTTC TATGCCCAAT
CCACTGTCGC ATCTCCAGGG TGTGCAGCGG GCAAAATATG GTGGGGCGTC GCAGGCTGGT
GCTGATCGGT TAGTGACTGG GTTGGTTCTG GTCCAGCCAG GTCAGCAGAA CCCTGCTGAG
TTTGACCAGA CTCTGCGTGA CATTGTCAAT TTCCTGCAAT ATGCCGCCGA GCCTGCGGCG
TTACAACGGC ATTCTTTGAG AGTATGGGTA CTGTTGTTCC TAGTGTTGTT GACTTTCTTG
GTTTATCTAC TTAAGAAGGC TTATTGGGAG GACGTGCATT GA
 
Protein sequence
MADWGRLRRC LCWILCLLLP CVLMSAAQAV DDVPLEHAGN DVSDRMSLQR GVQLYMNYCV 
GCHSLKYLRY SRIAADLGLS EVQVMSTLNV TGAKFGDTIM TGMPVDTSEQ WFGKIPPDLS
LVARVRGSDW IYTYLRSFYV DSTRPLGWNN RLFVNVSMPN PLSHLQGVQR AKYGGASQAG
ADRLVTGLVL VQPGQQNPAE FDQTLRDIVN FLQYAAEPAA LQRHSLRVWV LLFLVLLTFL
VYLLKKAYWE DVH