Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1917 |
Symbol | |
ID | 6120197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1997596 |
End bp | 1998378 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641649874 |
Product | hypothetical protein |
Protein accession | YP_001776423 |
Protein GI | 170730990 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.109207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAAGT TTCCATCTTG GGTGTTAGTG GCGGATTGGC CGCCGCCGCC CGGTGTCATG GCATTGAGCA CGTTGCGCGA TGGGCCTGGT TTATCCGTAG CACCATTTGA TCGGTTGAAT CTGGGGAACT GTAGTGGTGT TGCAGGTGAT GCTCCTGTGT GTGTGGAGCG GAATCGGTCG CGTTTGGTCG AGATGCTGGG GTTACCTTCG GCGCCGCACT GGTTGCGGCA AGTGCATGGT GTGGAGGTGT TGCGTGTCGA TGCACTTCCG CAGTCGATCG CTCGTGTGGT TGAGCCGACG GCTGATGCTG CGGTGACCAG TGTGGCTGGG GCGGTCTTGG TGATTTTGAC TGCGGATTGT TTGCCGGTCG TCTTGGCTGC TGTTGATGGG AGTGAGATCG GTGTTGTACA CGCTGGTTGG CGTGGTTTGG CTGATGATGT GTTGGAGCGC ACGGTGGCTG CGTTGCGGAC GTCGCCAGAG TGTTTGCAGG CGTGGCTTGG GCCTGCGGCT GGTCCACAGG CCTATGAGGT TGGTGTGGAT GTGTATGCAG CGTTCGTTGA GCGGGACTCG GGTGCAGCTT GTGCTTTTTC AGTAACCCGT CCCGGGCATT GGTATGTTGA TTTGTATGCG TTGGCACGAC AGCGTTTGAT GCGTGCGGGG CTGTCGGCAG TTTCTATTTA TGGGGGGGGC TTATGCACAA TCTCCGATCC GCAACGATTT TTCTCGCACC GCCGTGATCG GCGCAGCGGA CGTTTTGCCA CGTTGGCGTG GATTGGGTGT TAA
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Protein sequence | MGKFPSWVLV ADWPPPPGVM ALSTLRDGPG LSVAPFDRLN LGNCSGVAGD APVCVERNRS RLVEMLGLPS APHWLRQVHG VEVLRVDALP QSIARVVEPT ADAAVTSVAG AVLVILTADC LPVVLAAVDG SEIGVVHAGW RGLADDVLER TVAALRTSPE CLQAWLGPAA GPQAYEVGVD VYAAFVERDS GAACAFSVTR PGHWYVDLYA LARQRLMRAG LSAVSIYGGG LCTISDPQRF FSHRRDRRSG RFATLAWIGC
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