| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1907 |
|---|
| Symbol | |
|---|
| ID | 6120187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1986785 |
|---|
| End bp | 1987387 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641649865 |
|---|
| Product | riboflavin synthase subunit alpha |
|---|
| Protein accession | YP_001776414 |
|---|
| Protein GI | 170730981 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0307] Riboflavin synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGG GCATTATTGG TGGGGTGGGT CGTCTTGCTG CGCGCGTGCT GCAGGGAGGC
GATGTGCGTT TTACGTTCGA GGTCGGCACA CTACCGTTCT CCGAGGTCAG TTACGGAGAA
AGCATTGCGG TGAATGGTGT TTGTTTAACG GTGACCGCAT TCGACGCGCT GTGCTTTCAA
GCAGATGCCT CCACGGAGAC GCTTGCTCTG ACCACCCTTG GTCAGTTACC TGAAGGGGCG
ACGCTTAACT TAGAGCGGGC GATGTGCCCG ACCGATCGCT TAGGTGGTCA CTTGGTCAGT
GGTCATGTCG ATGGCATTGG TCGGGTCTTG TCGGTTCACG AGGACGCGCG TGCGCAGCGT
TGGAGTTTCG CTGCTCCGGT ACCGTTGCTG AAGTATGTGG CGAAAAAGGG TTCGATCTGT
GTCGATGGGG TCAGTTTGAC CGTCAATGCG GTGAATGCGA AAGGGTTCGA GGTGGCGTTG
ATTCCGCACA CGGTGGCGCA TACTCGGTTT TCTCGTACGG TGATCGGTGA GGCAGTGAAT
CTGGAGATTG ATTTAATCGC ACGCTACGTC GAACGTTTGT TGGTGACGGG GAACAAGCAA
TGA
|
|---|
| Protein sequence | MFTGIIGGVG RLAARVLQGG DVRFTFEVGT LPFSEVSYGE SIAVNGVCLT VTAFDALCFQ
ADASTETLAL TTLGQLPEGA TLNLERAMCP TDRLGGHLVS GHVDGIGRVL SVHEDARAQR
WSFAAPVPLL KYVAKKGSIC VDGVSLTVNA VNAKGFEVAL IPHTVAHTRF SRTVIGEAVN
LEIDLIARYV ERLLVTGNKQ
|
|---|
| |