Gene Xfasm12_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1904 
SymbolnusB 
ID6120184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1984690 
End bp1985163 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content53% 
IMG OID641649862 
Producttranscription antitermination protein NusB 
Protein accessionYP_001776411 
Protein GI170730978 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGG TTTCCGGTGG CGGACCGTGT CCGAGACGCC GGGATGGTGT TGATCCAGCG 
CTGCGTTCAC GTGCGCGCCG TCGTGCTTTG CAAGCGGTGT ACGCTTGGCA GATCTCTGGT
GGTGTTGCTA AGCAGGTAAT TGCTCATTTT GCACATGAGC AGGCGTATGA GGTGGCTGAT
TTGGTCTATT TTGAAGATTT GGTTGAGGGG GTATTGACCC ACTGCGCCGA ATTGGACGAG
AAGTTGACCC CGTATCTTGA CCGCACGATA GAGGAGGTCG ATGCGATTGA GAGGGCGGTG
TTGCGTTTGG GGGCTTACGA ATTGCTGTAT CGCCAGGATG TCCCTTACCG AGTAGTGATC
AATGAGGCGA TCATGACTGC TAAAAGGTTT GGTTCTAAGT ATGGTCATAC TTACGTCAAT
GGTGTGCTTG ATCGTGCTGC GCTTGCCTTG CGTAAAGTTG AGGTGCTTGG ATGA
 
Protein sequence
MSKVSGGGPC PRRRDGVDPA LRSRARRRAL QAVYAWQISG GVAKQVIAHF AHEQAYEVAD 
LVYFEDLVEG VLTHCAELDE KLTPYLDRTI EEVDAIERAV LRLGAYELLY RQDVPYRVVI
NEAIMTAKRF GSKYGHTYVN GVLDRAALAL RKVEVLG