| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1903 |
|---|
| Symbol | |
|---|
| ID | 6120183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1983625 |
|---|
| End bp | 1984599 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641649861 |
|---|
| Product | thiamine monophosphate kinase |
|---|
| Protein accession | YP_001776410 |
|---|
| Protein GI | 170730977 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAGT TTGATTTGAT TGACCGCTTG CGTGGTCGTA TCCGTCCGCG CCAGGACGTG
TTGTTAGGTG TGGGCGATGA TGCTGCACTC TTGCAGCCAC CACAGGGTGA ACCATTGGTG
GTCACCACCG ATACGCTGAA TGCCGGTGTG CATTTCCCAG TTGAGACCCA TCCTGAGGAT
CTTGGTTGGA AAACGCTTGC GGTCAGTGTC TCGGATTTGG CAGCGATGGG GGCAACGCCA
CGTTGGTGTA CGTTGTCCTT GTCGTTGCTC CAGGTGGATA TGGCATGGAT TGATGCTTTT
GCAGATGGAT TTTTCGAGCT GGCCGATCTA CACGGTCTTG TTCTGGTCGG TGGTGACACG
ACATACGGCC CCTTGGCTAC GTCGGTGACC GCGATTGGTT GCGTGCCACC GGGTATGGCC
TTGCGTCGTG ATGGTGCTTG TATTGGCGAT GATATTTGGG TGACTGGCCG TCCTGGCGAG
GCTGCTGCGG CATTGGCGAT GTGGTGTGCT GGGATGCTTG ACATTACCAA GTGTGCGCCT
GATCCGCGCT GTGAGATATT GCGCCAGAGG TTGTTACGTC CGACGCCTCG GGTGGAAGTA
GGGCTCGCTT TGCGGGGATT GGTGCATGCT GCGGTGGATC TTTCCGATGG CCTTCTCGCC
GATTTGGGGC ACATTTGTGC AAGCAGTGGG GTTGGAGCAG TGTTGGAATG TACGTCCTTA
CCGCGTGTTG CAGTGCATGG CGGATGGGAT GAGGCGCAGG TTTCTTCTTG GCAATTGGCC
GGTGGTGATG ATTATGAGCT TTGTTTTACA GCAGCACCGC AGTGTGGTGC CCCAATACAG
GACGTGTGCG CCACTTTGGG TGTTGAGGTG ACACGCATTG GGCGCATTGT GGTTGGTGAG
ACAGTGCAGG TTCTCAATGC TGCGGGTGTG CCTTGGCAAC TTTCGAGAAA AGGTTATCAG
CACTTCATGG ATTAA
|
|---|
| Protein sequence | MLEFDLIDRL RGRIRPRQDV LLGVGDDAAL LQPPQGEPLV VTTDTLNAGV HFPVETHPED
LGWKTLAVSV SDLAAMGATP RWCTLSLSLL QVDMAWIDAF ADGFFELADL HGLVLVGGDT
TYGPLATSVT AIGCVPPGMA LRRDGACIGD DIWVTGRPGE AAAALAMWCA GMLDITKCAP
DPRCEILRQR LLRPTPRVEV GLALRGLVHA AVDLSDGLLA DLGHICASSG VGAVLECTSL
PRVAVHGGWD EAQVSSWQLA GGDDYELCFT AAPQCGAPIQ DVCATLGVEV TRIGRIVVGE
TVQVLNAAGV PWQLSRKGYQ HFMD
|
|---|
| |