| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1895 |
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| Symbol | |
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| ID | 6120175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1977114 |
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| End bp | 1977701 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641649854 |
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| Product | type 4 fimbrial biogenesis protein |
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| Protein accession | YP_001776403 |
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| Protein GI | 170730970 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAT CCCGGGGCTA TACATTGCCG GAGCTATTAA TCACGATGGC GCTAATCGCA
TTATTGACCG CCATCGGGTT ACCATTCTTC AAACAAACTC TGGAACGTCA AAGACTGGAA
AATAAAATGC ATTTGCTGAG TTCCCAGTTC GCAGGCGCCA GACTGGCAGC CATCACCCAA
CAAACGCCCG TCAGCGTCTG CCCGAGTCGC GGAGACAATA AATGTCGTCA AGATAGTAAT
TGGAGCAATG GCTGGATCAC CTATCGCGAT TCGAGTCGCA AGCCACAACC CACCTCATCA
AAAGCCATTT TGTACCAAGA GCAAATCACC AATAACGGTT CTCTAAGCAT TATCTCCACA
TCTGGACGGC CACGGGTTCG CTTCCTTCCA GATGGCCGCA ATGCCGGCAG CAATATCAGC
ATCCGCTTCT GCAACAATGA CCGCTTATTC GGCCTCATCG TGATCAACAA TTTAGGCCGA
ATTCGCTCGC AACGGATACT TAATACTCAA ACCTGCTCAA CAGATCAGAA AATAAAAAAC
GGGCTAACAA TACCTAAAAC TTCCCAAACA GAAACACCAT TCCAATAA
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| Protein sequence | MQSSRGYTLP ELLITMALIA LLTAIGLPFF KQTLERQRLE NKMHLLSSQF AGARLAAITQ
QTPVSVCPSR GDNKCRQDSN WSNGWITYRD SSRKPQPTSS KAILYQEQIT NNGSLSIIST
SGRPRVRFLP DGRNAGSNIS IRFCNNDRLF GLIVINNLGR IRSQRILNTQ TCSTDQKIKN
GLTIPKTSQT ETPFQ
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