| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1883 |
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| Symbol | |
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| ID | 6121604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1964959 |
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| End bp | 1967745 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641649843 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001776393 |
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| Protein GI | 170730960 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.320358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCACG TCGCTATTGA TTCACATCGG TATATTCCCC GCAATCTTCT GTGTGCATCC
ATTTCTGGTG TACTCCTCGT TGCTGCCGTC AGCGTTCAGG CACAAGAAAC TAACGCTGCA
AGCAATTTAG AACGTATTAC CGTCACAGGT TCTAATATCC CCCGCACGGA TACCGAGACC
GCGTCGCCAG TCCAGATTGT CACTCGTGAG GACATCGCGC GTTCCGGTCG TGCCACAGTT
GGAGAATATC TACAGACTTT GACTTCTGAT GGCCAGGGTT CGATACCCAA GAATTTTGGT
AACGGTTTCG CAATGGGTGG GAGTGGTATC TCGTTGCGTG GTTTGGGTGC CGGCTCCACT
CTGGTGCTGA TTAACGGTCG TCGTATCGCT TCCTACGGGT TGGCCGACGA TGGTCAGAAG
TTGTTCGCTG ATTTGAGTAG CATCCCGATG GATGCGGTTG AGCGTGTCGA AGTTCTGAAG
GACGGTGCGT CCTCAATTTA CGGATCTGAC GCGATCGCCG GTGTAGTCAA TATTATTTTG
CGTAATGACT TTCAGGGCGC TCTTGTGAGT GCTTCATATG GTCTTTCTGG TTATAGGGAT
GGCCATACCC CAAAGGCCAC AATGACCGCA GGCGTTGGTA ATTTGGCATC CGATGGCTGG
AATGCGCTTG TGAGCGTGGA TGTTGGCAAG AGTGATGGGA TCATGACGAG TGACCGGAAA
GATCGTAAGT GGATCGGTAC TGGTGATACT CGTCCCTGGG GCTACGACCT CGCGAACAGT
CAGCAGTTTC TTCGGGGTGC GATTACTGGC AAAGGTACTA TTGCCGACTC TTCCCCGGTA
GGGGCCGTCC GTAACCCATC TAATAATCAG TTCAGTTCGC TACCAGGCTG TTCAAATTTT
TCCAGTGTTT CGCCGCAGGA TCCAGGAGGC GGCTGCTTAT GGGATGTTGC TCAGTTCCGT
AGCCTGACTC CGGATGAGAA ATACGCTAAC GTCTTCACTC GTGGCACTTT CACTCTGTTC
GATACCACTG AGTTATATAC CGAGCTGAGC TACTCTAAGA AAAAGTCCGA GTTTAGTAAT
TTTCCATCTT TCGTTTCAGG TGCTTGGGGC TATCCAGGCG GTGCGGTCAA TGCCAGTAGT
GGTGACGGTG CTACGGTCTT GGCCGCTGGG CATCCGGACA ACCCGTACAA CGGACCTGCG
CGCGTGCGTT ATGCAGCGTT TGACGTTGGC CCTCGTGTGA AAGAAAACAC AAATGACTTT
ATGCGTGTTG TGTTGGGGAT CAAGGGAAGT GTTGCCAGTT GGGATTATGA TGTCAGCGCC
TTGCATTCTC AGTCACAAAT GGACAGGAAG TTCACTGGTT ATTTGCGCTA TAGCTCTGTG
CGTTGTGTGC TTGGAAACTT AGCCTGCCCT GCTGGTGTAT GGAATATTGG TAATGGCTCC
GAAACTAACC CGCGGTCGCT GTATGATTTC ATTTCGCCTG TACTTAGCGC GCAGGCCAAA
ACCAAGCTGG ATGTGTTTGA TGCAAGGGTC TCGCGTGCAT TGGCTGACTT ATCCGGTGGT
GCTATGGGCT TGGCGATGGG TGTGGAGTAC CGTCGCGATC AAGCTTCGTT AACCCCAGTG
ACTTATACCG ATATAGGCGA CATCATCGGT GTGGGGTATT CGGCCTATGG TGGTGAAGAA
AAGGTGAGTG CTGCATATGC TGAACTAGCC GCGCCGTTTA CCAAAGCTTT TGAGGCGACT
GTGGCTGGTC GTGTTGACCA CTACAGTAGT GGCAACACCG CCATTACTCC GAAGTTGGGA
ATGAAGTGGA AACCTTTTGA GTGGTTTGCG TTACGTGGCA CTTATGCCCA GGGTTTCCGT
GCACCGAATG TTGCTGAGTC CGGTAAAGGT GGTGGTTTAG CTGCGTTTGC GAACGTAAGC
GACCCAGTGC GTTGTGCGGC TACAGGCGGG AGTGGTGCTG AATGTGCGCC TCGTTTCGTT
TCAGTTATCA CTAGCCCGAA TCCAGATCTG AAGCCTGAGA AGTCAAATAG TTATACGCTT
GGCATGGTGT TCCAGCCGAC TAGCAGTACA TCTATGACGG TGGATGGCTG GCAAATCAAG
CGTACTAAAG AGATTGCCCA GATCGGCACA GTTGATGCGA TCAACGCAGG TGATGTAATA
CGTGACGATA ACCTGTTGAA AGGTGTTGCC GGCACTGGTC AGTTGCTTGG GGTCAAGGCC
AAATACGTCA ATCTCAACGC CACTACAGCA CGTGGTGTGG ATACTGACGT ACAGCAGCGT
ATTGCCATGG GTGGACTCGG TGATTTGATC CTGGATTTGC AGTGGAGTCG CATGCTTAAG
TTTCAGCGCG AGGACGCTAA TGGCAACATC AGTGAGTATG CCGGTACGCA TGGTAATTGC
GATGTAAGCA ATTGCATTGG TACTCCGAAG GACCGGATTA ATTTTGGGGC GACTTGGAAA
TTGAACAACA TCAGCGTGAG TGCGTTAGGC CATTACCGTA GCCCGATGGA AAATAGGCTG
TTTAAAGGTG GTGCTTGCGT CAGCCATTTT GCCGATGGAA GTGATGCTCC AATTGATTGC
CGTTTGAACG CGTTTACCTC CGTGGATTTG TCAGCAAATT GGCAGGCCAC TGAAGCACTG
GCCGTGTTTG GTTCAGTGCA GAACCTGTTT GACCGAATCG CTCCACTTGA TCCGTTGACC
GGTGGGGCAC TGAACTATAA CCCGTTGGAT TCTGCGGGTG CGGTTGGTCG CTTCTTCACA
GTTGGCGCTC GCTACGCCTT TAAGTAA
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| Protein sequence | MTHVAIDSHR YIPRNLLCAS ISGVLLVAAV SVQAQETNAA SNLERITVTG SNIPRTDTET
ASPVQIVTRE DIARSGRATV GEYLQTLTSD GQGSIPKNFG NGFAMGGSGI SLRGLGAGST
LVLINGRRIA SYGLADDGQK LFADLSSIPM DAVERVEVLK DGASSIYGSD AIAGVVNIIL
RNDFQGALVS ASYGLSGYRD GHTPKATMTA GVGNLASDGW NALVSVDVGK SDGIMTSDRK
DRKWIGTGDT RPWGYDLANS QQFLRGAITG KGTIADSSPV GAVRNPSNNQ FSSLPGCSNF
SSVSPQDPGG GCLWDVAQFR SLTPDEKYAN VFTRGTFTLF DTTELYTELS YSKKKSEFSN
FPSFVSGAWG YPGGAVNASS GDGATVLAAG HPDNPYNGPA RVRYAAFDVG PRVKENTNDF
MRVVLGIKGS VASWDYDVSA LHSQSQMDRK FTGYLRYSSV RCVLGNLACP AGVWNIGNGS
ETNPRSLYDF ISPVLSAQAK TKLDVFDARV SRALADLSGG AMGLAMGVEY RRDQASLTPV
TYTDIGDIIG VGYSAYGGEE KVSAAYAELA APFTKAFEAT VAGRVDHYSS GNTAITPKLG
MKWKPFEWFA LRGTYAQGFR APNVAESGKG GGLAAFANVS DPVRCAATGG SGAECAPRFV
SVITSPNPDL KPEKSNSYTL GMVFQPTSST SMTVDGWQIK RTKEIAQIGT VDAINAGDVI
RDDNLLKGVA GTGQLLGVKA KYVNLNATTA RGVDTDVQQR IAMGGLGDLI LDLQWSRMLK
FQREDANGNI SEYAGTHGNC DVSNCIGTPK DRINFGATWK LNNISVSALG HYRSPMENRL
FKGGACVSHF ADGSDAPIDC RLNAFTSVDL SANWQATEAL AVFGSVQNLF DRIAPLDPLT
GGALNYNPLD SAGAVGRFFT VGARYAFK
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