| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1872 |
|---|
| Symbol | |
|---|
| ID | 6121593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1952419 |
|---|
| End bp | 1954575 |
|---|
| Gene Length | 2157 bp |
|---|
| Protein Length | 718 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641649834 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_001776384 |
|---|
| Protein GI | 170730951 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGTG CACGTTCGCA TGCCATCGAC TTGAACGTAG CTGGCAATGC CCCATTGTCG
GTGCTGCCGC GGGTTGGGCC GGTATTAGCT GGAAAATGCG CTGCACGTGG CATCTTCACC
TTGCAGGATT TGTGGCTACT GCTCCCATTA CGTTATGAGG ACCGTACCCG GCTAACTCCG
ATTGCCGAGC TTCAGGATGG GGTTGCGGTT CAGATCGAGG CCCGAGTGGA AGCGGTGGAG
CGTAGTTTCC GTTACCGGCC GCTATTACGT GTGGTGTTGT CCGACGACGC ACATCACATA
CTGACGATGC GTTTTTTCCA TTTTCGCGCC GCACAGATTG CACGGTTTAC TGTCGGCACA
CGGGTGCGTG CGTATGGCGT ACCCAAACTT GGCCAATATG GTTGGGAGAT TGTCCATCCC
AGCTACCGCA TTCTTGCCCC TGGTGAAGCT GTCAGCCTCA ATGACTGCTT GGACCCGGTG
TATCCGGTGA TTGATGGTGT GGGGCCTGCC ATCGTGCGTC AGCTCATCCG CGAAGCGTTG
GAACATTTAC CTACGGATGC AGTCTTAGAA CTCTTGCCAG ACGTTTGGTT GAGTGACCTT
GGCCTGCCAA CGCTGCGTAC TGCCCTACTG ATCATGCACC GGCCCCCGCT GGATGCGGAT
ATTGCCCGAT TGATGGTGGG CACTCACCCC GCGCAGCAGC GCTTGTCGTT GGAAGAATTG
CTTGCCCACC AACTCAGCCT GCGTCGCCAG CGTATTGCAT TGCAACGTCA TTCCGCCCCC
GCATTGCCTG ATGGAGCGGC TTTGGTGGCC TCTTTGTTGC ATGCACTGCC GTTTCACCTC
ACTGCTGCGC AGCAACGGGT ATTCGCCCAG ATTGCTGCTG ATGTGGCCAA GCCGGTCCCA
ATGCTGCGTC TTGTGCAGGG TGATGTTGGC AGCGGTAAGA CCGTGGTTGC AGCATTGGCC
GCATTGCTTG CTGTTGAGCA AAACAAGCAG GTGGCTCTGG CGGCACCGAC AGCGTTACTG
GCCGAGCAAC ACTTTATCAA CCTGCGTGAC TGGCTGGAGC CATTGGGCGT GCGTGTGCAT
TGGTTGGCTG CCAAGGTGAC CGGCAAGGCC CGTCTCCAAG CGCTGAATGA TGTGGCCTCT
GGTGATGCGC AGGTGGTGGT CGGCACACAT GCCCTGATGC AGGAGTCTGT GGTGTTTCAT
GACTTGGCAC TGACCATTGT CGATGAACAG CACCGTTTTG GCGTCCATCA GCGCTTGTTG
CTTCGTGACA AAGGGGCCAT TGCTGGCATT GTGCCGCATC AGTTAGTGAT GACCGCTACA
CCGATTCCAC GCACCTTAGC GATGGCTGCG TATGCTGATT TGGATGTTTC GGTGATTGAC
GAAATGCCGC CTGGCCGTAC CCCGGTGCAA ACGAATGTAT TGAGTGCTGA GCGTCGCCCG
GAATTGGTGG AACGTATCCG TCTGGCTTGT GCTCAGGGGC GCCAGGTTTA TTGGGTGTGT
ACGCTGATCG ACGAAAGCCA AACGGAAGCA GAACAGGCAC CCCCCAGCAG TAACGATATT
GGGCATCGCA GCGAAGTACA GGCGGCACAG GCCACCTATG AAGCACTGTC TGCACAATTG
CCTGGTGTCC GTGTCGGACT CGTGCATGGG CGCATGAAAG CAGCGGAAAA ACAGCGGACA
ATGCGTGCAT TCAAATACAA CGAAATTGAT GTCTTGGTTG CTACCACGGT GATTGAGGTG
GGTGTCGATG TCCCCAATGC GTCGCTCATG ATTATCGAAA ATGCTGAGCG TTTGGGTTTA
GCGCAACTCC ATCAGTTACG TGGTCGGGTC GGACGTGGTT CTGTTGTGTC AAGTTGCGTT
CTGTTGTATC AGCCCCCGCT GTCGATGCTG GCGCGTCAGC GTCTGCAAAT CATGCGCCAG
ACGAACGATG GTTTTGCGAT TGCTGAAAAA GATCTGGAAT TACGTGGTCC CGGCGAATTG
TTGGGGACAC GTCAAACAGG TCTTGCAGCG TTTCGTGTTG CTGACCTTGC CCGCGATGCC
CATCTGCTGC CCCGCGTGTA TTCGTTGGCG AACGTGTTGC TTGACGAATC GCCACAGTTA
GCTGATCAAG TGATTGCGCG CTGGATTGGT AGTGCGGTGC GTTATGCATC CGCCTGA
|
|---|
| Protein sequence | MLRARSHAID LNVAGNAPLS VLPRVGPVLA GKCAARGIFT LQDLWLLLPL RYEDRTRLTP
IAELQDGVAV QIEARVEAVE RSFRYRPLLR VVLSDDAHHI LTMRFFHFRA AQIARFTVGT
RVRAYGVPKL GQYGWEIVHP SYRILAPGEA VSLNDCLDPV YPVIDGVGPA IVRQLIREAL
EHLPTDAVLE LLPDVWLSDL GLPTLRTALL IMHRPPLDAD IARLMVGTHP AQQRLSLEEL
LAHQLSLRRQ RIALQRHSAP ALPDGAALVA SLLHALPFHL TAAQQRVFAQ IAADVAKPVP
MLRLVQGDVG SGKTVVAALA ALLAVEQNKQ VALAAPTALL AEQHFINLRD WLEPLGVRVH
WLAAKVTGKA RLQALNDVAS GDAQVVVGTH ALMQESVVFH DLALTIVDEQ HRFGVHQRLL
LRDKGAIAGI VPHQLVMTAT PIPRTLAMAA YADLDVSVID EMPPGRTPVQ TNVLSAERRP
ELVERIRLAC AQGRQVYWVC TLIDESQTEA EQAPPSSNDI GHRSEVQAAQ ATYEALSAQL
PGVRVGLVHG RMKAAEKQRT MRAFKYNEID VLVATTVIEV GVDVPNASLM IIENAERLGL
AQLHQLRGRV GRGSVVSSCV LLYQPPLSML ARQRLQIMRQ TNDGFAIAEK DLELRGPGEL
LGTRQTGLAA FRVADLARDA HLLPRVYSLA NVLLDESPQL ADQVIARWIG SAVRYASA
|
|---|
| |