Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1865 |
Symbol | |
ID | 6121586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1945284 |
End bp | 1946009 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649828 |
Product | OmpA family protein |
Protein accession | YP_001776378 |
Protein GI | 170730945 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATGC GAGCGGCCCT TAAGCCTATG TGTACAGTTC TGGCGGTGGC GCTGGTGCTG TCCGGTTGTG CTACAGGTGG ATCTTATGTG CAGCGTGACC AGTCTGGTAA TTCCACAGAG CAGCGAAACC GGACCGGGCG GGATGCGGCC ATTGGTGCGG CCATTGGCGC GGCTGCGGGT TTGTTGACTG GTAAAAATGC CACCAAGCGG AGACAGCGCG CGATGATTGC TGCTGGTATC GGTGCACTTG GCGGGGCAGC GATTGGTAAT TACCAGGATC GTCAAGAACG CGCTCTGCGT GAGCGCACGG CCAATACTGG CATTGATGTC AAGCGTGACG GTGACAATAT CACTCTCAAT TTGCCGGACG GTATTACTTT CGATTTTGGT AAGTCGATGC TCAAGCCGCA ATTTTATGGC GCACTTAAAA ATGTCGCTTC GACGTTGCGC GAGTATAACC AGACGATGAT TGAGGTGGTT GGTTATACCG ATAGTATTGG CAGTGATGTG GTGAATCAGC GCTTGTCTGA AGATCGTGCT GGTGCGGTTG CTAGTTATTT AGCAGCACAA GGTGTGCAGC GTGAACGTAT GGAAATCTCG GGGATGGGAA AACGTTACCC GATTGCCGAT AACAGTACAG AAGCTGGGCG TAGTAAGAAC CGGCGTGTTG AAATACATTT GATTCCATTC AGTGCTGAAA ATAGCGGTGC CACAGGCATG CATTGA
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Protein sequence | MMMRAALKPM CTVLAVALVL SGCATGGSYV QRDQSGNSTE QRNRTGRDAA IGAAIGAAAG LLTGKNATKR RQRAMIAAGI GALGGAAIGN YQDRQERALR ERTANTGIDV KRDGDNITLN LPDGITFDFG KSMLKPQFYG ALKNVASTLR EYNQTMIEVV GYTDSIGSDV VNQRLSEDRA GAVASYLAAQ GVQRERMEIS GMGKRYPIAD NSTEAGRSKN RRVEIHLIPF SAENSGATGM H
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