| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1861 |
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| Symbol | |
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| ID | 6121582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1938818 |
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| End bp | 1941382 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641649825 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_001776375 |
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| Protein GI | 170730942 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.894237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCACA TAGCAAACAA CACTGCCGTG CGTTGCATTT GTTTTTTAAC AATTAGGAAT
TCTAAGGCAA TACCAAAGCC TAAGCTCATC TATACTCTAC GGTCAAAAAG TTCGCAATCC
AATATCGATT TAAATATGTA TCGTCTCCGC GGTTGGCTTG GGTGGCTCCT CACCATACTT
ATCATCCTCA CACTCGTTGG CATCCTGGCA GCGGGCAGTA TGTATTACGC CATTTCCTCG
AAACTGCCCG ACATTCGAAA CCTCAAACAA GTCGAACTAC AAGAACCAAT GTACGTCTAC
TCCCACGATG GCCTGTTGAT AGCGATATTC GGGGAAATCC GCCGCTACCC TGTGCAGATC
AAGGAAGTGC CTGAGCAACT TAAACAAGCA TTCCTAGCGA CCGAAGACGC TCGTTTCTAC
GAACACAGCG GCATTGACTA TAAAGGAATT GCACGCGCAA TTTGGCTACT AGCGACAACA
AACGAAAAAC GTGTCCCAGG TGGTTCAACG ATTACTCAAC AGGTTGCCCG CCAATTCTTT
CTCAACTCCG AATACAGCTA TAAACGCAAA CTGGCTGAAA TTCTATTAGC TAGAAAAATA
GAGTCGCAGT TAAAGAAAGA CGAAATCCTG GAGCTGTATC TAAACAAAAG TTTTTTCGGA
AACCGTGCCT ACGGCATCGC TGCTGCAGCC GAGTTTTACT ACGGCAAGAA ACTAAACGAA
CTTAACCTTG ATGAGATGGC ATCCTTAGCT GGGATCCCCA AGTTTCCATC CAGCGGCAAC
CCGATTACCA ACCCGGCTCG TGCCCGCGAA CGGCGTGATT TATACGTACT ACAACGCATG
GTCGACCTTA ACTTCATCAC CCAAGACCAA GCCAATGCCG CAAAAGCAAT ACCGATGCAC
GCCAAACCCC ACGAACCACC CGTCCAGGTA TACGCCCCCT ACGCAGCCGA AATGGTACGT
CAGGAAATGA TCGCCAAATA CGGTGGTGCC GCACTCAACA AAGGCTATCA CGTCACCACC
ACGATTGATG GCACACTTCA AATGGCCGCC GAAACTTCCG TACGCAACGG CCTAGCGTTA
TATGAACATC GCCACCGTTG GCGAGGTGCC GAACAACATA TCGAAGTGGA TGCAAACGCA
GACACAGCTA CATTAGCTGC ACACCTGTCA GGCATTTCCT CCCAAGGTGG GATGTTCCCC
GTGATCGTGG CACGTACCAC TCCCGAAGGC AGCGCCATCG TGGTACGTAG TGATCACAGC
GAATTGACGC TCCCCCCGGC AGCCGCGCGC TGGACCGGCA CTCCACTGAA CAAACTCCTC
AAACGTGGTG ACGTGGTTCG GGTCCGGCCT GGGGAAAAAC GGGGTGAATG GACATTAGAA
CAGCTACCCA GCGCTCAATC CACATTGGTC TCACTAGATG CCAACAATGG CGCACTACGT
GCACTCGTCG GTGGCTTCAG CTTCACCGCT AATAAATTCA ATCGCGCCAC CCAAGCACGC
CGCCAACCTG GGTCGAGCTT CAAGCCATTC GTCTATTCAG CCGCATTAGA AAAAGGCTTC
AATCCAGCGT CCATCGTACC GGATGCACCC GTCATATTCC GCGATCGCCG CGGCCATACC
TGGTCGCCAC AGAACGATGA CGGCAAATTC CAAGGTCCAA TGCGTATCCG TGACGCCCTG
GTTCAATCAC GCAACCTAGT ATCAGTACGA CTACTCGACG CAATCGGCGT AGATTTTGCA
CGCAACTACA TTACCCAATT CGGTTTTGAG GAAAACGAGA TTCCTCCAAA CTTATCAATG
TCTCTGGGTA CAGCCTCACT CACTCCATTG TCGATCGCGC GCGGTTACGC AGTATTTGCA
AACGGCGGCT TCCGCATCGA CCCTTGGCTT ATTGACGAGA TACACGACAG AGAACACAAA
TTAATCTTCA AGAACAACCC TAAGGTAGCC TGTCGCAGCT GCACGTCGGC CAACACCAAC
GTCACTCAAT CAACCAGCCA CCTAGTGGAC GGATTCAACT TTGGCGCACC CACCAAAACA
GAACCATCCA AACCAGTAAA AAACAACAAC GAACCTCCCC AGACCATCCC TTCACCGGAT
CCCAACACCC CAATGGCACC GCGCGCGATT GATGAACGCG TTGTCTTCCA ATTGGTATCA
ATGATGCGCG ACGTGGTGCT ACGCGGTACA GCAACCGCAG CACGCTCACT GAATCGCCAG
GACATCGCCG GAAAAACTGG CTCAACCAAC GAACACCGTG ATGCGTGGTT CTCAGGCTTT
GGGGGACCTT ACGTAACTAC CGTATGGGTA GGACGCGATG ACTTCCAGTC ACTTGGTTAC
AGAGAGTATG GCGGCAAAGC AGCACTCCCC ATCTGGATCG AATATATGCG CACTGCATTG
AAGGACAAAC CAATCGCACG CAACGCCCCC CCTCAAGGCA TGACTCAAAC CACACTCAAC
GGAGCAACCG AATGGGTCAA AAACGAAGAT ATAAACCACT TACAAGATCA TGATTTCAAG
TTGCATGAAG AAGAAAGTGA TGAACAGACC TTTGACATCT TCTGA
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| Protein sequence | MHHIANNTAV RCICFLTIRN SKAIPKPKLI YTLRSKSSQS NIDLNMYRLR GWLGWLLTIL
IILTLVGILA AGSMYYAISS KLPDIRNLKQ VELQEPMYVY SHDGLLIAIF GEIRRYPVQI
KEVPEQLKQA FLATEDARFY EHSGIDYKGI ARAIWLLATT NEKRVPGGST ITQQVARQFF
LNSEYSYKRK LAEILLARKI ESQLKKDEIL ELYLNKSFFG NRAYGIAAAA EFYYGKKLNE
LNLDEMASLA GIPKFPSSGN PITNPARARE RRDLYVLQRM VDLNFITQDQ ANAAKAIPMH
AKPHEPPVQV YAPYAAEMVR QEMIAKYGGA ALNKGYHVTT TIDGTLQMAA ETSVRNGLAL
YEHRHRWRGA EQHIEVDANA DTATLAAHLS GISSQGGMFP VIVARTTPEG SAIVVRSDHS
ELTLPPAAAR WTGTPLNKLL KRGDVVRVRP GEKRGEWTLE QLPSAQSTLV SLDANNGALR
ALVGGFSFTA NKFNRATQAR RQPGSSFKPF VYSAALEKGF NPASIVPDAP VIFRDRRGHT
WSPQNDDGKF QGPMRIRDAL VQSRNLVSVR LLDAIGVDFA RNYITQFGFE ENEIPPNLSM
SLGTASLTPL SIARGYAVFA NGGFRIDPWL IDEIHDREHK LIFKNNPKVA CRSCTSANTN
VTQSTSHLVD GFNFGAPTKT EPSKPVKNNN EPPQTIPSPD PNTPMAPRAI DERVVFQLVS
MMRDVVLRGT ATAARSLNRQ DIAGKTGSTN EHRDAWFSGF GGPYVTTVWV GRDDFQSLGY
REYGGKAALP IWIEYMRTAL KDKPIARNAP PQGMTQTTLN GATEWVKNED INHLQDHDFK
LHEEESDEQT FDIF
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