| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1860 |
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| Symbol | |
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| ID | 6121581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1937655 |
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| End bp | 1938713 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641649824 |
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| Product | fimbrial assembly membrane protein |
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| Protein accession | YP_001776374 |
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| Protein GI | 170730941 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.151761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGGCTTT TTTCCAAAAA ACAGTCGGTA TTGGTTGGTG TCGACATTAG TTCAACTGCA
GTGAAGCTCT TACAGCTTTC CCGCAGTGGT AATCGCTTCA AGGTGGAACA CTATGCTGTG
GAGCCGCTAC CTCTGAATGC AGTCGCCGAG AAGGGCATCG TTGAAGTCGA GCAGGTTGGT
GAAGCAATCC GTCGTGCGGT AAGTCGTTCT GGAACTAAGG CCAAATTTGC CGCTGCTGCG
GTTGCCGGTT CGGCAGTGAT CACCAAGTTG ATACCGATGC CTGCTGGTCT GGAGGAGCAG
GATTTGGAAG CCCAGATAGA AATAGAGGCT ACGAATTACA TCCCGTACCC TATTGAAGAG
GTCAGCCTAG ATTTCGAGGT GCTTGGTCCG GTTCCCAACA ACACGGAGAT GGTCCAAGTT
TTGCTGGCTG CGTCTCGTTC GGAGAATGTC GAATTGCGCC AATCTGCGTT GGAGTTGGGT
GGGTTGACTG CCAAGGTTAT TGACGTGGAA GCTTTAGCGG TTGAGAACGC TTTCTCTCTT
ATTGCCCAAG AACTGTCGGT TGGGAGTAAT GCATTGGTTG CATTGATCGA CATCGGTGCA
ACGATGTCGA CGCTTAATGT GCTGCATAGT GGTCGCAGTT TGTACGCGCG CGAGCAGCTA
TTTGGTGGTA AGCAGCTTAC TGACGAAGTG ATGCATCGCT ATGGGATGAC TTACGAGGAG
GCTGGTCAGG CCAAGCGTCA AGGAGGTTTG CCGCAAAGCT ATGATGTTGA AGTGCTGGGA
CCATTTAAGG ACTCTGTGAT ACAGCAGATC AGCCGTTTAT TACAGTTTTT CTATGCTGGC
AGTGAGTACA ACCGAGTTGA TTGCATCGTG TTGGCGGGAG GCTGTGCTGT GATTGCGGGG
TTACCGGCTA TGGTCGAAGA ACGGTTGGGT GTCGTTACCG TTGTGGCTAA TCCGCTTGCG
CAGATGACTT TAGGGGCGAA AGTGCAAGCA CACACGCTTG CTCAAGATGC ACCTGCTTTA
ATGATTGCTA CTGGTCTGGC TTTGAGGAGT TTTGACTGA
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| Protein sequence | MGLFSKKQSV LVGVDISSTA VKLLQLSRSG NRFKVEHYAV EPLPLNAVAE KGIVEVEQVG
EAIRRAVSRS GTKAKFAAAA VAGSAVITKL IPMPAGLEEQ DLEAQIEIEA TNYIPYPIEE
VSLDFEVLGP VPNNTEMVQV LLAASRSENV ELRQSALELG GLTAKVIDVE ALAVENAFSL
IAQELSVGSN ALVALIDIGA TMSTLNVLHS GRSLYAREQL FGGKQLTDEV MHRYGMTYEE
AGQAKRQGGL PQSYDVEVLG PFKDSVIQQI SRLLQFFYAG SEYNRVDCIV LAGGCAVIAG
LPAMVEERLG VVTVVANPLA QMTLGAKVQA HTLAQDAPAL MIATGLALRS FD
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