| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1859 |
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| Symbol | |
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| ID | 6121580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1936990 |
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| End bp | 1937655 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641649823 |
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| Product | fimbrial assembly membrane protein |
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| Protein accession | YP_001776373 |
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| Protein GI | 170730940 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0439918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGAA TTAACTTATT GCCCTGGCGC GTTGAGCGCC GCAAGCAGCG TGAGCGTGAG
TTCTATGTGA TGCTTGGTTT TTCCACATTG GTGGGTATCC TCGTTTCGGC GCTTGTGTGG
TTTTATTATG ACGCGCAGGT CAGTGGTCAG AATGATCGCA ACGCATTCTT GGTTTCCGAG
ATAGAGGGGG TTAAGGCGCA GAATCGGGAA ATCGACCAAC TTGACAAGAA GAAAGAGCAT
TTACTGGCGC GTAAGAAAGT GATCGAAGAG CTGCAATCAA ACCGTTCGCA AATGGTTCAT
TTATTCGATT CGTTGGCACG TACCATCCCT GATGGCGTGG TTCTGACCAC TATTAAGCAG
GAAGGTAATA GTTTGACTTT GCAAGGACGC TCTCAGTCAA ACGTGAGAGT CAGTACTTAC
ATGCGCAATA TTGAGGGGTC AGGATGGATG ACTAATCCCG ATTTGTCGAT TATTGAAGCC
AAGGAACAAG ATAAAAATAC GCTCATTGAT AGCAGGGCTC TGCCCTATGT ATTTACTATC
AAAGCAAAAC TGTCCAAGCC AGAGTCGCCA GATGAGGCTC GTCATAGGCC CATATCTCCT
AATTCTGGGA AAGCCTCTGC GTCGTCGTCT GCTGATTTTA AGCCGCTGTC AGAGGACAAT
CGATGA
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| Protein sequence | MARINLLPWR VERRKQRERE FYVMLGFSTL VGILVSALVW FYYDAQVSGQ NDRNAFLVSE
IEGVKAQNRE IDQLDKKKEH LLARKKVIEE LQSNRSQMVH LFDSLARTIP DGVVLTTIKQ
EGNSLTLQGR SQSNVRVSTY MRNIEGSGWM TNPDLSIIEA KEQDKNTLID SRALPYVFTI
KAKLSKPESP DEARHRPISP NSGKASASSS ADFKPLSEDN R
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