Gene Xfasm12_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1857 
Symbol 
ID6121578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1935798 
End bp1936328 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content50% 
IMG OID641649821 
Productfimbrial assembly protein 
Protein accessionYP_001776371 
Protein GI170730938 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3168] Tfp pilus assembly protein PilP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00682106 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACAA AAACCCTCAA AAAAATAGTC GGTTTGATTG TTCTCTTGGT ATTAGTCGGT 
TGCATGCGTA GTGTAACCAC CTCGTTTGGC GATGCACCAG ATTTGAAAAA TTGGGTGAGT
GAGGTGCGTG CGCGTCCTGC TCCACCTCTG GAACAACTAC CAGTGATGCA GCAGTTTGAA
ACCTTTGAGT ATTCTGCGCA GGGAATGCGT GATCCCTTTA GCGACGCTTG GGTTAATCCT
GAGGAGGGCA ATGGGTTACG CCCAGATCCG CATCGACGTA AGGAGCCGCT GGAAGCATTC
CCACTTGATA CATTGAAGAT GGTGGGTACG ATCGGTAGGG GTGCTGGTTT GGTTGCAGTG
ATTACTGCTC CTGACAAATT CACTTATCGG GTGCGTCGAG GGATGTATAT TGGACAGAAC
GATGGGCGAG TTACCAAGGT GAATGAAGAT CGCGTCGAAC TTGTGGAACT TGTTTCAAAT
GGCGAGGGAG GATGGTTGGA ACGGCCAGCC GCACTTTCGT TCGACGATTA A
 
Protein sequence
MSTKTLKKIV GLIVLLVLVG CMRSVTTSFG DAPDLKNWVS EVRARPAPPL EQLPVMQQFE 
TFEYSAQGMR DPFSDAWVNP EEGNGLRPDP HRRKEPLEAF PLDTLKMVGT IGRGAGLVAV
ITAPDKFTYR VRRGMYIGQN DGRVTKVNED RVELVELVSN GEGGWLERPA ALSFDD