Gene Xfasm12_1852 details

Gene Information

• Locus tag: Xfasm12_1852
• Symbol: thiE
• ID: 6121573
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylella fastidiosa M12
• Kingdom: Bacteria
• Replicon accession: NC_010513
• Strand: +
• Start bp: 1926759
• End bp: 1927373
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641649816
• Product: thiamine-phosphate pyrophosphorylase
• Protein accession: YP_001776366
• Protein GI: 170730933
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0352] Thiamine monophosphate synthase
• TIGRFAM ID: [TIGR00693] thiamine-phosphate pyrophosphorylase

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCCAGC CTCGCGGCAT CTACCTAATT ACTCCTGATG AAACTGACAC TGCACGACTT 
ATCGCACGCA CCGCACCATT ACTGAATGGA ATCGTTTGGC TGCAATACCG CAACAAACTA 
GCCAATACCG CATTACGCAC AGAACAAGCA CAGGCACTAC TAGCCCTATG CCGTCCAACC 
GGCATCCCCC TACTCATCAA CGACGACTTG GAATTAGCAC AAACCATTGG CGCAGATGGT 
GTCCACCTGG GCATGCATGA CAGCAACCCC AGCATTGCGC GAGCACAATT AGGACCGCAC 
GCCATCATAG GCGTCTCCTG CTACAACCAA ATTGAACGTG CGAAACAAGC AATCAAAGCC 
GGTGCCAGCT ACGTAGGCTT CGGTGCGTTC TATCCGAGTC ATACCAAAAC CACCCCATAC 
CGCGCCACAC CAGAACTGCT ACACCAAACC ACCCATTTGG GTGTACCACG CGTGGCCATC 
GGCGGACTGA CGCCAAAGAA TATTGCTCCC ATTATCGAAG CTGGTGCAGA GCTACTCGCA 
GTGATCAGCG GAATCTACTC TGCAAAAAAT CCAATCACTG CACTGAAAGC ATATCAATAC 
CAATTCAACA TCTGA 

 

Protein sequence

MSQPRGIYLI TPDETDTARL IARTAPLLNG IVWLQYRNKL ANTALRTEQA QALLALCRPT 
GIPLLINDDL ELAQTIGADG VHLGMHDSNP SIARAQLGPH AIIGVSCYNQ IERAKQAIKA 
GASYVGFGAF YPSHTKTTPY RATPELLHQT THLGVPRVAI GGLTPKNIAP IIEAGAELLA 
VISGIYSAKN PITALKAYQY QFNI