| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1824 |
|---|
| Symbol | |
|---|
| ID | 6121543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1895567 |
|---|
| End bp | 1896868 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641649790 |
|---|
| Product | putative nitrate transport system ATP-binding protein |
|---|
| Protein accession | YP_001776342 |
|---|
| Protein GI | 170730909 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
[COG4754] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGT CCGATGTCTC TCAGAACAGC CCCTTGGTGA GTGTGCGAGG GGTTTGTAAG
ACTTACGACA AAGGAGCTGC CGCCTCGTTA GTGGTCTTAG AGGATGTCGA CCTGAGCTTA
TATTCGGGGG AAATTGTCGG TTTACTCGGA CGATCAGGTT CAGGTAAATC CACCTTGTTA
CGCGCCATTG CAGGGCTGTT GCAGCCTACG ATGGGTGAAA TTGCCTACCG TGATGGCGGA
CCGGATGGGT TGGCGATGGT GTTTCAGAGT TTTGCGTTGT TTCCGTGGTT GACCGTACAG
CAGAACGTGG AAGTTGGTCT TGAGGCACGC GGTGTGCTGC CGGAGGAGCG GCGGCGGCGA
GCTTTGGCGG CAATTGACTT GATTGGTATG GATGGTTACG AAAACGCCTA TCCAAAGGAG
TTATCCGGTG GCATGCGTCA GCGTGTGGGT TTGGCACGTG CATTGGTGGT CCATCCTAAG
TTGTTATTGA TGGACGAGCC GTTCTCGGCA TTGGATGTGC TGACCGCCGA AACGTTGCGC
ACTGATTTAC TCGACCTGTG GAGTGAGGGA CGGATGCCGA TTGAATCAAT CCTCATGGTG
ACCCATAACA TTGAGGAGGC GGTGTTGATG TGTGACCGCA TTATGATCTT CGGTTCCAAT
CCTGGGAGAG TGATCGGTGA GATTGCGGTG GCGTTGCCAC AACCACGTAA CCGCTTGGAT
CCGGCGTTCC GTGTTCTGGT GGAGGACATC TATGCGCGCA TGACGGTACG TTCGTCAGCG
CCTGCGCGTG AAGGCAATTT CCCAGGGACC GGTATCGGTA TGGTCTTACC CCAAGTTTCG
TCGAACTTGT TAGCCGGCTT ACTCGAAACA GTCGCGGCTG AACCCTATAA CGGTCAAGCC
GACTTGCCGC CACTGGCGGC TAGTCTGCAA TTGGAAATCG ATGATTTATT TCCGATTGCT
GAGACCTTGC AATTGCTGCG TTTGGCTGAA CTTGAATCGG GAGATCTGCG TCTGACGGTG
GTTGGGCAAC GTTTTGTCGA TGGTGATATC GACGAGCGTA AACGGTTGTT CTGTCAGCAG
TTGGCGACGT ATGTCCCGCT CGCTGTTCAC ATCCGCCGTG TCCTTGATGA CCGCGTTAGT
CATCAAGCAC CGTTGAGCCG TTTTAGCGAT GAGTTAGAGG ATTACATGTC CGAAGCTAGC
GCCGCACAGA CGCTCAAGGC CGTGATCAGC TGGTCGCGTT ATGCCGAATA CTTTGCTTAC
GATGAGCAAG CCGGGTTGCT TACCCTGGAA AATCCGAGTT GA
|
|---|
| Protein sequence | MNLSDVSQNS PLVSVRGVCK TYDKGAAASL VVLEDVDLSL YSGEIVGLLG RSGSGKSTLL
RAIAGLLQPT MGEIAYRDGG PDGLAMVFQS FALFPWLTVQ QNVEVGLEAR GVLPEERRRR
ALAAIDLIGM DGYENAYPKE LSGGMRQRVG LARALVVHPK LLLMDEPFSA LDVLTAETLR
TDLLDLWSEG RMPIESILMV THNIEEAVLM CDRIMIFGSN PGRVIGEIAV ALPQPRNRLD
PAFRVLVEDI YARMTVRSSA PAREGNFPGT GIGMVLPQVS SNLLAGLLET VAAEPYNGQA
DLPPLAASLQ LEIDDLFPIA ETLQLLRLAE LESGDLRLTV VGQRFVDGDI DERKRLFCQQ
LATYVPLAVH IRRVLDDRVS HQAPLSRFSD ELEDYMSEAS AAQTLKAVIS WSRYAEYFAY
DEQAGLLTLE NPS
|
|---|
| |