Gene Xfasm12_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1821 
Symbol 
ID6121540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1892259 
End bp1893116 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content54% 
IMG OID641649788 
Productlipoprotein precursor 
Protein accessionYP_001776340 
Protein GI170730907 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACAG CAGCAACAGA TAACAACACC GCAGACAATA CTCCGACCCA AGCGGAAGAT 
GACTACTCTG CGCTTTACGG AGCCATTTCG CCGTCTGTTG GTCATTCCGA TACAAGCATA
CCCACGCCAA ACGACACTCA CGCGACCTAC GATCCTTGGG AACGCTACAA CCGTGCAATG
CACCAATTCA ACGTCGTTAT AGACCACAAT CTCGCGCGGC CACTGGCTAA CGCGTATGTA
CATGTCGTGC CAAAGAAGGC GCAAGTGGGT GTGACCAATT TTTTCAATAA CCTTAGCTCA
CCGCTGACAA TGGTCAACCA AGTGCTGCAA AACCACCCAG TCTATGCATT ACAGACGCTG
GGCCGGTTTC TGCTGAATTC CACGCTAGGG CTGGGCGGTC TCCTTGATCC AGCCAGCGCA
GCGAAAATTC CGCGCCGCAC CGAGAATTTT GGGCAGACTT TGGCACTTTG GGGCTGGTAC
AACTCACGCT ACTTCGAACT TCCCCTGTTT GGGCCGCGCA CAGTGCGCGA CACCTTTGGC
TTGGCAGGGG ATCTTCCGCT GTCCCTATTA CGGCGAATCG ATAACAACAC ATGGCGTTAC
GGTCTACAGG GTCTGCAATT GGTTGACACC CGCGCTCGGC TGTTATCGTT TGACAACATG
CGCGACGGCG CTGTAGACGA TTATGCACTC ACACGGGACG CTTGGTTACA ACGCCGCAAT
TACCAAATCC AAAATGCACT GCGCAAGAAC AATCAGGACA CGAATGACAA TAGTGAGCTG
CCCGACTACC TGCGTGAAGA GCATGACTCC ACCACGGTAC CGGTAGATGC AATGCCAATC
CCGCGCTTGA GCCGCTGA
 
Protein sequence
MPTAATDNNT ADNTPTQAED DYSALYGAIS PSVGHSDTSI PTPNDTHATY DPWERYNRAM 
HQFNVVIDHN LARPLANAYV HVVPKKAQVG VTNFFNNLSS PLTMVNQVLQ NHPVYALQTL
GRFLLNSTLG LGGLLDPASA AKIPRRTENF GQTLALWGWY NSRYFELPLF GPRTVRDTFG
LAGDLPLSLL RRIDNNTWRY GLQGLQLVDT RARLLSFDNM RDGAVDDYAL TRDAWLQRRN
YQIQNALRKN NQDTNDNSEL PDYLREEHDS TTVPVDAMPI PRLSR