| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1817 |
|---|
| Symbol | |
|---|
| ID | 6121536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1889674 |
|---|
| End bp | 1890423 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641649784 |
|---|
| Product | toluene tolerance protein |
|---|
| Protein accession | YP_001776336 |
|---|
| Protein GI | 170730903 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACTGG TATCTTCAAT CAGCTCGCTA GGCCGCTCTG GTCTGTTTGC ACTCACTGTA
TTACGCAGCT CGCTGCCCAC ACGCGACTTC TTCGCCGAAC TGATCCGTGA AATCTACAAG
ATTGGCGCGC GCTCGCTACC AATCATCGCC GTCGGAGGCG CGTTCGTCGG CTTGGTACTG
ACCTTGCAAG GCTACCGCAC ACTCACTCTG TATGGCGCTT CCGACGCACT ATCCACCCTC
CTAGGCCTAT CACTGTATCG CGAACTTGCC CCCGTGCTGA CTGCTCTGCT TTTCATCGGA
CGTGCGGGCA GCTCAGTGGC GGCGGAACTG AGCCTGATGC GTGCGACCGA TCAGATCAAG
GCACTGGAGC TGATGGCCAT CGACCCCATC GCTAAAGCAG TGGCGCCACG CTTTTGGGCA
GCGGTATTGA CTGTACCTCT ACTCACAGGT GTGTTTTGCT CACTGGCCAT CTGTAGTGGT
TACTTCCAAG CAGTCCATGT GTTAGGCATC GACAACGGTT TATTCTGGTC AGGATTGAGC
AACAGCGTGG ACTTTTTGGA GGATTTCGGC GTAGCAATGC TCAAATCAGC AATCTTTGGT
GGCACCTCGG CTCTTGTGGC AGCTTACGTA GGCTTCCATG CGCAACCAAC CATTGAGGGC
ACTTCAATCG CAACCACGCG TGCAGTCGTC AACGCGTCAT TACTGGTATT GATGTTTAAC
TTCGTGCTAT CAGCACTATT ATTCCGATAA
|
|---|
| Protein sequence | MPLVSSISSL GRSGLFALTV LRSSLPTRDF FAELIREIYK IGARSLPIIA VGGAFVGLVL
TLQGYRTLTL YGASDALSTL LGLSLYRELA PVLTALLFIG RAGSSVAAEL SLMRATDQIK
ALELMAIDPI AKAVAPRFWA AVLTVPLLTG VFCSLAICSG YFQAVHVLGI DNGLFWSGLS
NSVDFLEDFG VAMLKSAIFG GTSALVAAYV GFHAQPTIEG TSIATTRAVV NASLLVLMFN
FVLSALLFR
|
|---|
| |