Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1815 |
Symbol | |
ID | 6121534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1885269 |
End bp | 1888634 |
Gene Length | 3366 bp |
Protein Length | 1121 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641649782 |
Product | exodeoxyribonuclease V gamma chain |
Protein accession | YP_001776334 |
Protein GI | 170730901 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGGA TGATAGTCAC CACTGACTTT CGCCTATACC ACTCCAATGC ACTCGACGTT CTGGCGGGAT TGCTGGCCGA AACGTTGCGG TCCCCGGTGC CGGGCCAGTC GTTGTTGGTC CCAGACACAA TATTGATTCC ACAAGCGGCA ATGCGGCGTT GGTTGCAAGC CACGTTGGCC ACCACGCATG GTGTCGTGGC CAATCTGGAA TTTTTGACTC CGGGCGAGTT CGTTGCCCGT GCATTGGATG CCAATCTTGG TGCCGTGCCG AACGCTTTGG ATACAGCCGT GTTGCATTGG CGACTATATG CAGCGTTGTG CGATCCAGCA TTACTGACGG AACCAGCCCT TGCTGAATTA CATGCTTACC TGGCAGATGG CGACCTCTTC AAACCTTGGA CATTGGCCGA AGCACTGAGT GCGGCATTCG AAAAATACCA GGCTTGGCGT TGCGACTGGT TGCTACGTTG GGAGGCGGGC GCAGATCCGG ACGATCCACA GGCCATCCTA TGGCGGCATA GTGTCAACGG TGCCACGCAC CGCGCACGCC GCATCCACGA CTACCTGAAC CGTTATGGGT CAGGGACAGC CCCCCCCCCC CAAGGACTGC CAGCGCGACT CTTTATTTTC GCCACCCTCA ACATCTCTCC AGATGTATTA CGTGTCCTGG CGACCCAGGC ACAGGTTGGC ACACTGCACT TTTACCTGCC GACCCCGACC AAAGAATATT GGGGTGATGC GCAACCCTTC ACGCAACGCT TGCATCAGCC CACCGACTGC GTCACCCAGA CCGGAGAAAA CCGCCTACTC CATGCCTGGG GTGCTGCCGG GCGTGATTTC ATGACTGTGT TGGGGAGCTA CGAAGTCGTC CATCCCTCCG GCGAAATCAC CGCATACGAT GATCCGGAAC AACGTCCAGG CACCACACTG GATGAAGGCG GCCTGCGCGA TAGCCTATTG CAGCGCCTGC ATGCGGATCT ATTCCATAAC CGTTCGGCAC CTGTCCCCGC CCCCTTGCCC GCACCGCGTC TGGAAGATCC CAGTCTCCAG TTTCACGCCT GTCATACCCG ACTGCGTGAA CTCCAGGTCC TTCATGACCG GCTCCGTGCC TTGCTGGAAC CTAACTCACC GGAGGGACAG CGTTTTAACC CTCCCTTACA ACCGCGTGAG ATTGCCGTAT TGGCACCGGA CATCGACCTC TACATCCCCT ATCTAGAAGC CGTGTTCGGT GGACACGCCC ATAGCGACCC CTTGCCATAC ACACTGGCTG ATGCCAGCCC ACTGATTGAT GAACCGCTGG CTGAAGTCTT CTTGCGTCTC CTCGACTTGC CCGTATCCCG CTTTGGCCTG CACGAAATAT TGGACCTCCT GGCCAGCCTG CCGATGGCCA CCCTTGCTGG CTTTGACACA CAGACCTTAG AGATCCTGCG GAGCTGGCTG ACCGCCGCCG GCGCACGCTG GGGATTGGAT GCTGCCCACC GTGCCGAACA CCAAGCCCCG GCTGACGACG CCTACACCTG GAACTTTGCA CTGGACCGCC TCCTCCTGGG TCACGCCAGC GGCGCAGATG CCGATATTGC TGGCGTCGCT GCTTGGTCGG ATCTGGAAGG CAGCATGCTG ACCGCATTGG ACACCCTGAT CCGATTACTG CGCGTCCTCG CCAATACACG ACAACGCCTG AGTGAGGCCC TATTACCGAC ACAGTGGCGA GAACGCTTAC TGAGCCTGCT TGATGCACTC CTGCCTGACA TCCCCACCGC ACCATCCGGT ATCCAGCGTC CCTTAGAACG CTTACGCAGA CTGATCGACA CCTTCGCCAC CGATGCCACA CGCGCCGGAG TGGCCTTACC CGTGCCAGCC GAAGTCGTGC GTATGCACTT TGCCGCTTTA CTAGCCGACA CCGATACCCG CGCCCCACTG CTCACAGGTG GCATCAGTAT TGGCCGCATG GTTCCCATGC GACTGCTCCC CTTCCGTGTC ATCTGTTTGT TAGGCATGAA CGACGGCGAC TTCCCGCGCC GCGATCCTGC GGCTGGCCTC AATCGCCTCA CCGCCGAACT TGGCAACGCA CAGCGTCGCC CTGGTGATCG CTCCCGACGT GATGACGACT GCCTCCTACT TCTACAGCTA TTCAGCGCCG CCCAAGACGT CTTCTACGTC AGCTACCTTG GCGCTGATCC CCACGACGGC AGCCTACGCG AACCCTCACC GCTGCTCACA GAACTACTTA GCACCGCAGC CACCTACCAT GCCGACCCCA GTACAGCCGC CAAAACACTG CTACTGCGGC ATTCATTACA GCCATTCTCC CCCACCGCCT TTGGCGCCGA CGGCGACCCA CGCCGATTCA GCTACCACCC CTTATGGCAG GCCGCCGCCG CGAGTATTGA AGGACAGCGC CACCCTCTGG ACCCCTGGTG TCCCCGCCGA CTCCCAGCCC TTCCAGACCC CGAACCCGCC CTGCCACTGC ACAGCCTGCG GCGCTTCTTT AGCGCCCCTG CAGAACAGTT CCTACAACAG CGCCTGGGCC TACGCCTGCC CGAACTCCCT CAGACCACCG ATGAATGCGA CCCCCTCTGG CTTCCCAGTC ACGGCCTAGA ACGCCATCGA CTCGACACCC TGATATTTGC CTCCCTACTC CATGAGACTG ACGACGCCCT CTACCCACAA CTACGCGCCC GCGCATTACT CCCCTCAGGT CCCTTAGGCC AACAGCAACT CCAAGAACGC ATTGAACACC TGCGCCCCTA TGCCCAAGCA TTTGCACACT GGCGCGGTAC CGCCCTCCCA CAGTCCCAGT GCCTTGAAGT AATGATCGAC GGCATCCGTC TCCACGCACA CATTCAGGAC CTCTACCCCC ACGGAATCGC CCGCCTGCGC CTGGGCACCC CTAACGGCCC CGCAGTACTG CGCCACGGAT TAGATTGGCT GCTGGCCAGC GCCGCCGGCC ACCCCTGGCC CCTGGTCCGC TTTGAAGATG CAGGCGTTGC GGGCCTAGGT CCCCATCTAC AGCCATCCTT GCCCAGTTCC CAAGCACAGA CCGCACTGAC CCTACTACTC CGCTTGCGCA CGGCTGGCCT GTGCCAGCCC CTACCCTTTG CCCCCTACAG CGCCTGGGAG TACTACACCC AGCGCGACAC CCCCGAACGT GCCTTGCAGA CCGCCCGCGC CCGCTGGCGT GGTAACGACC ACCAATGGGG CGAAAGCAAC CATGCAGCGA TCCAATTAGC ACTGCGTAAC CACGATCCCT TTGCCACCCC GCAGACCGCT GCCCACTTTG CACAGCTCGC AACACTGATA TTTGACCTAC TCACCACCGG TCAGGCCGAC CCAGAACCCT TGACCTGGCT GCAACTGCAC CCATGA
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Protein sequence | MSRMIVTTDF RLYHSNALDV LAGLLAETLR SPVPGQSLLV PDTILIPQAA MRRWLQATLA TTHGVVANLE FLTPGEFVAR ALDANLGAVP NALDTAVLHW RLYAALCDPA LLTEPALAEL HAYLADGDLF KPWTLAEALS AAFEKYQAWR CDWLLRWEAG ADPDDPQAIL WRHSVNGATH RARRIHDYLN RYGSGTAPPP QGLPARLFIF ATLNISPDVL RVLATQAQVG TLHFYLPTPT KEYWGDAQPF TQRLHQPTDC VTQTGENRLL HAWGAAGRDF MTVLGSYEVV HPSGEITAYD DPEQRPGTTL DEGGLRDSLL QRLHADLFHN RSAPVPAPLP APRLEDPSLQ FHACHTRLRE LQVLHDRLRA LLEPNSPEGQ RFNPPLQPRE IAVLAPDIDL YIPYLEAVFG GHAHSDPLPY TLADASPLID EPLAEVFLRL LDLPVSRFGL HEILDLLASL PMATLAGFDT QTLEILRSWL TAAGARWGLD AAHRAEHQAP ADDAYTWNFA LDRLLLGHAS GADADIAGVA AWSDLEGSML TALDTLIRLL RVLANTRQRL SEALLPTQWR ERLLSLLDAL LPDIPTAPSG IQRPLERLRR LIDTFATDAT RAGVALPVPA EVVRMHFAAL LADTDTRAPL LTGGISIGRM VPMRLLPFRV ICLLGMNDGD FPRRDPAAGL NRLTAELGNA QRRPGDRSRR DDDCLLLLQL FSAAQDVFYV SYLGADPHDG SLREPSPLLT ELLSTAATYH ADPSTAAKTL LLRHSLQPFS PTAFGADGDP RRFSYHPLWQ AAAASIEGQR HPLDPWCPRR LPALPDPEPA LPLHSLRRFF SAPAEQFLQQ RLGLRLPELP QTTDECDPLW LPSHGLERHR LDTLIFASLL HETDDALYPQ LRARALLPSG PLGQQQLQER IEHLRPYAQA FAHWRGTALP QSQCLEVMID GIRLHAHIQD LYPHGIARLR LGTPNGPAVL RHGLDWLLAS AAGHPWPLVR FEDAGVAGLG PHLQPSLPSS QAQTALTLLL RLRTAGLCQP LPFAPYSAWE YYTQRDTPER ALQTARARWR GNDHQWGESN HAAIQLALRN HDPFATPQTA AHFAQLATLI FDLLTTGQAD PEPLTWLQLH P
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