Gene Xfasm12_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1815 
Symbol 
ID6121534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1885269 
End bp1888634 
Gene Length3366 bp 
Protein Length1121 aa 
Translation table11 
GC content61% 
IMG OID641649782 
Productexodeoxyribonuclease V gamma chain 
Protein accessionYP_001776334 
Protein GI170730901 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGGA TGATAGTCAC CACTGACTTT CGCCTATACC ACTCCAATGC ACTCGACGTT 
CTGGCGGGAT TGCTGGCCGA AACGTTGCGG TCCCCGGTGC CGGGCCAGTC GTTGTTGGTC
CCAGACACAA TATTGATTCC ACAAGCGGCA ATGCGGCGTT GGTTGCAAGC CACGTTGGCC
ACCACGCATG GTGTCGTGGC CAATCTGGAA TTTTTGACTC CGGGCGAGTT CGTTGCCCGT
GCATTGGATG CCAATCTTGG TGCCGTGCCG AACGCTTTGG ATACAGCCGT GTTGCATTGG
CGACTATATG CAGCGTTGTG CGATCCAGCA TTACTGACGG AACCAGCCCT TGCTGAATTA
CATGCTTACC TGGCAGATGG CGACCTCTTC AAACCTTGGA CATTGGCCGA AGCACTGAGT
GCGGCATTCG AAAAATACCA GGCTTGGCGT TGCGACTGGT TGCTACGTTG GGAGGCGGGC
GCAGATCCGG ACGATCCACA GGCCATCCTA TGGCGGCATA GTGTCAACGG TGCCACGCAC
CGCGCACGCC GCATCCACGA CTACCTGAAC CGTTATGGGT CAGGGACAGC CCCCCCCCCC
CAAGGACTGC CAGCGCGACT CTTTATTTTC GCCACCCTCA ACATCTCTCC AGATGTATTA
CGTGTCCTGG CGACCCAGGC ACAGGTTGGC ACACTGCACT TTTACCTGCC GACCCCGACC
AAAGAATATT GGGGTGATGC GCAACCCTTC ACGCAACGCT TGCATCAGCC CACCGACTGC
GTCACCCAGA CCGGAGAAAA CCGCCTACTC CATGCCTGGG GTGCTGCCGG GCGTGATTTC
ATGACTGTGT TGGGGAGCTA CGAAGTCGTC CATCCCTCCG GCGAAATCAC CGCATACGAT
GATCCGGAAC AACGTCCAGG CACCACACTG GATGAAGGCG GCCTGCGCGA TAGCCTATTG
CAGCGCCTGC ATGCGGATCT ATTCCATAAC CGTTCGGCAC CTGTCCCCGC CCCCTTGCCC
GCACCGCGTC TGGAAGATCC CAGTCTCCAG TTTCACGCCT GTCATACCCG ACTGCGTGAA
CTCCAGGTCC TTCATGACCG GCTCCGTGCC TTGCTGGAAC CTAACTCACC GGAGGGACAG
CGTTTTAACC CTCCCTTACA ACCGCGTGAG ATTGCCGTAT TGGCACCGGA CATCGACCTC
TACATCCCCT ATCTAGAAGC CGTGTTCGGT GGACACGCCC ATAGCGACCC CTTGCCATAC
ACACTGGCTG ATGCCAGCCC ACTGATTGAT GAACCGCTGG CTGAAGTCTT CTTGCGTCTC
CTCGACTTGC CCGTATCCCG CTTTGGCCTG CACGAAATAT TGGACCTCCT GGCCAGCCTG
CCGATGGCCA CCCTTGCTGG CTTTGACACA CAGACCTTAG AGATCCTGCG GAGCTGGCTG
ACCGCCGCCG GCGCACGCTG GGGATTGGAT GCTGCCCACC GTGCCGAACA CCAAGCCCCG
GCTGACGACG CCTACACCTG GAACTTTGCA CTGGACCGCC TCCTCCTGGG TCACGCCAGC
GGCGCAGATG CCGATATTGC TGGCGTCGCT GCTTGGTCGG ATCTGGAAGG CAGCATGCTG
ACCGCATTGG ACACCCTGAT CCGATTACTG CGCGTCCTCG CCAATACACG ACAACGCCTG
AGTGAGGCCC TATTACCGAC ACAGTGGCGA GAACGCTTAC TGAGCCTGCT TGATGCACTC
CTGCCTGACA TCCCCACCGC ACCATCCGGT ATCCAGCGTC CCTTAGAACG CTTACGCAGA
CTGATCGACA CCTTCGCCAC CGATGCCACA CGCGCCGGAG TGGCCTTACC CGTGCCAGCC
GAAGTCGTGC GTATGCACTT TGCCGCTTTA CTAGCCGACA CCGATACCCG CGCCCCACTG
CTCACAGGTG GCATCAGTAT TGGCCGCATG GTTCCCATGC GACTGCTCCC CTTCCGTGTC
ATCTGTTTGT TAGGCATGAA CGACGGCGAC TTCCCGCGCC GCGATCCTGC GGCTGGCCTC
AATCGCCTCA CCGCCGAACT TGGCAACGCA CAGCGTCGCC CTGGTGATCG CTCCCGACGT
GATGACGACT GCCTCCTACT TCTACAGCTA TTCAGCGCCG CCCAAGACGT CTTCTACGTC
AGCTACCTTG GCGCTGATCC CCACGACGGC AGCCTACGCG AACCCTCACC GCTGCTCACA
GAACTACTTA GCACCGCAGC CACCTACCAT GCCGACCCCA GTACAGCCGC CAAAACACTG
CTACTGCGGC ATTCATTACA GCCATTCTCC CCCACCGCCT TTGGCGCCGA CGGCGACCCA
CGCCGATTCA GCTACCACCC CTTATGGCAG GCCGCCGCCG CGAGTATTGA AGGACAGCGC
CACCCTCTGG ACCCCTGGTG TCCCCGCCGA CTCCCAGCCC TTCCAGACCC CGAACCCGCC
CTGCCACTGC ACAGCCTGCG GCGCTTCTTT AGCGCCCCTG CAGAACAGTT CCTACAACAG
CGCCTGGGCC TACGCCTGCC CGAACTCCCT CAGACCACCG ATGAATGCGA CCCCCTCTGG
CTTCCCAGTC ACGGCCTAGA ACGCCATCGA CTCGACACCC TGATATTTGC CTCCCTACTC
CATGAGACTG ACGACGCCCT CTACCCACAA CTACGCGCCC GCGCATTACT CCCCTCAGGT
CCCTTAGGCC AACAGCAACT CCAAGAACGC ATTGAACACC TGCGCCCCTA TGCCCAAGCA
TTTGCACACT GGCGCGGTAC CGCCCTCCCA CAGTCCCAGT GCCTTGAAGT AATGATCGAC
GGCATCCGTC TCCACGCACA CATTCAGGAC CTCTACCCCC ACGGAATCGC CCGCCTGCGC
CTGGGCACCC CTAACGGCCC CGCAGTACTG CGCCACGGAT TAGATTGGCT GCTGGCCAGC
GCCGCCGGCC ACCCCTGGCC CCTGGTCCGC TTTGAAGATG CAGGCGTTGC GGGCCTAGGT
CCCCATCTAC AGCCATCCTT GCCCAGTTCC CAAGCACAGA CCGCACTGAC CCTACTACTC
CGCTTGCGCA CGGCTGGCCT GTGCCAGCCC CTACCCTTTG CCCCCTACAG CGCCTGGGAG
TACTACACCC AGCGCGACAC CCCCGAACGT GCCTTGCAGA CCGCCCGCGC CCGCTGGCGT
GGTAACGACC ACCAATGGGG CGAAAGCAAC CATGCAGCGA TCCAATTAGC ACTGCGTAAC
CACGATCCCT TTGCCACCCC GCAGACCGCT GCCCACTTTG CACAGCTCGC AACACTGATA
TTTGACCTAC TCACCACCGG TCAGGCCGAC CCAGAACCCT TGACCTGGCT GCAACTGCAC
CCATGA
 
Protein sequence
MSRMIVTTDF RLYHSNALDV LAGLLAETLR SPVPGQSLLV PDTILIPQAA MRRWLQATLA 
TTHGVVANLE FLTPGEFVAR ALDANLGAVP NALDTAVLHW RLYAALCDPA LLTEPALAEL
HAYLADGDLF KPWTLAEALS AAFEKYQAWR CDWLLRWEAG ADPDDPQAIL WRHSVNGATH
RARRIHDYLN RYGSGTAPPP QGLPARLFIF ATLNISPDVL RVLATQAQVG TLHFYLPTPT
KEYWGDAQPF TQRLHQPTDC VTQTGENRLL HAWGAAGRDF MTVLGSYEVV HPSGEITAYD
DPEQRPGTTL DEGGLRDSLL QRLHADLFHN RSAPVPAPLP APRLEDPSLQ FHACHTRLRE
LQVLHDRLRA LLEPNSPEGQ RFNPPLQPRE IAVLAPDIDL YIPYLEAVFG GHAHSDPLPY
TLADASPLID EPLAEVFLRL LDLPVSRFGL HEILDLLASL PMATLAGFDT QTLEILRSWL
TAAGARWGLD AAHRAEHQAP ADDAYTWNFA LDRLLLGHAS GADADIAGVA AWSDLEGSML
TALDTLIRLL RVLANTRQRL SEALLPTQWR ERLLSLLDAL LPDIPTAPSG IQRPLERLRR
LIDTFATDAT RAGVALPVPA EVVRMHFAAL LADTDTRAPL LTGGISIGRM VPMRLLPFRV
ICLLGMNDGD FPRRDPAAGL NRLTAELGNA QRRPGDRSRR DDDCLLLLQL FSAAQDVFYV
SYLGADPHDG SLREPSPLLT ELLSTAATYH ADPSTAAKTL LLRHSLQPFS PTAFGADGDP
RRFSYHPLWQ AAAASIEGQR HPLDPWCPRR LPALPDPEPA LPLHSLRRFF SAPAEQFLQQ
RLGLRLPELP QTTDECDPLW LPSHGLERHR LDTLIFASLL HETDDALYPQ LRARALLPSG
PLGQQQLQER IEHLRPYAQA FAHWRGTALP QSQCLEVMID GIRLHAHIQD LYPHGIARLR
LGTPNGPAVL RHGLDWLLAS AAGHPWPLVR FEDAGVAGLG PHLQPSLPSS QAQTALTLLL
RLRTAGLCQP LPFAPYSAWE YYTQRDTPER ALQTARARWR GNDHQWGESN HAAIQLALRN
HDPFATPQTA AHFAQLATLI FDLLTTGQAD PEPLTWLQLH P