Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1814 |
Symbol | |
ID | 6121533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1881544 |
End bp | 1885272 |
Gene Length | 3729 bp |
Protein Length | 1242 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641649781 |
Product | exodeoxyribonuclease V beta chain |
Protein accession | YP_001776333 |
Protein GI | 170730900 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCC CCCATGACCC CTATCTGACC TTGCCCCTCC ACGGCGTGCG TCTGATTGAA GCCTCCGCGG GCACTGGTAA AACCTTCACC ATGGCCACCC TCGTCACCCG ACTTGTGGTC GAACGAGGCT GGCGCATCGG CCACATTCTT GCAGTGACCT TCACCGAGGC CGCGACCCAA GAACTACGCA CCCGGATCCG CGAGCGCCTA ATACTCGCCG CCCGTCTCGT CCCGCAGGCT GCTGAACTGC CGGTGCCCCT TCCCTCAGCA CAACCACAGA TGTCGCATCC AACACCCCAT CCCCAGGATG CACCTCGCAT CACTCCTGGA GTGACCAACT CCGCCTCCCC TGAACCCCCA GATGTTGTGT TGACCCTACA GATCCTGCGT ACCCACCTTG CCGCTACGGA TGAGACCCCA CACGCCCTGC ACTCCCGTCT ACAACAGGCC GCCGATGAAA TCGACCTCGC GGCGATTTTC ACCATTCATG GCTTCTGCAC ACGCGTACTG CGCGAACATG CCTTGCATAC CGGACAAAGC TTCATTCCGC CTACCTTACT GGCCAGTGAC CGCGATTTAC TACACGAACT GGCCGCCGAC ATATGGCGTC AAGAAATTGC TGATCCCGAG GCCATCCAAG ACCTCATCCA CCTCTGGCCC GCAGGCGCAC CGATGCTGGC TCAGGACCTG ACAGACCTGC TCTACCAACC GCACTTATCT CCCGCGCCAT CGCTGGCAGC ACCAGTGGTG CTGCCTGATG CTGCCCTTGC CGTCGCTGAG ACCACATTGC GCCACCTCTG GCAGACCGAG GGCGCGGCAC TGCGCAGCGC ACTGCACACC GCCTTAGAAG AGGGCGTCCT CAACAAGAAA AGCTACAAAG CCGATGCACT GAACGATCTC TGGGATTGGA TGGAACGCTG GAGCCTCGCA CCCAACGCCT ATCCAGAGCC ACACCCCAAA CTGCAAACAT TGACCGTTGC GGCCTTGCAA GCCGGCACCA ATAAACAGGG TGCCGGACGC AGCCCAAACT CCCCCGTGAG CGAAGCCGTA CAGCATTACC TGGACGCACT GACGAGCATC GAAACAGCAC GCGCCCAGCA TCGCTTACGT CGCCTGCATC GCTTGCGTGC CGCAGCCCGC CTCCGCCTCA CCGCACTCAA ACGCCAGCGT CGCGTACAGA CCTACGATGA TTTGATTCAA CGTGTCGCCC AGGCACTGGA TGGGCCGCAT CGCCTCGCCC TAGTGCGGTC CCTGCGCCAA CAGTACCGCA TGGCCCTCGT CGATGAATTC CAAGATACCG ACGTGGCCCA ATGGCGCATC TTTCATCACG TCTTTGGTGA TACCGAGCAC GCACACACCG CCGACCTCAC ACCCGCATTG TTTTTGATTG GCGACCCCAA ACAGGCCATC TATGGCTTTC GTGGTGGCGA CGTACACACC TACCTGGCCG CCGCCGCCCG TGCCGAACGC GCGCCCCCGC TGGAGCGTAA CTTCCGCTCC CGTCCCCTAT TACTGCGTGC CATTGAAGCA CTGTATACCC AAGCCGGCGA TGCAGCCTTC CTCACCCCAG GCATTGCCTT CCACCCCGTA CAGCCAGGCA CCCACTGCCG CGATACAGAC CTCAGCAACG CCGGAGTTCC CGCACCCGCG TTACAAGTGT GGCAAGCCCC ACCGCCATTG GACAGCACCG CCAAGGGCAA ACCCAAACCC TGGAATGCCG ATGCCGCGCG CGCCCTGTGC ACCGATGCCT GCGTCCATGC CATTCACCAA TGGCTTGCCG ACGCACAGAC CGGGCGCGCC CTGCTGGATG GCCGCCCCGT GGGTGCCGGC GACATCGCCG TATTGGTGCG CAGCCACCGT GAAGCCACAT TGATGCAGCA GGCCCTAGCG CGTGCGGGCA TTCCTGCCGT TGCTGCTGGC AAACGCAGCC TATTGACCAC CGACGAAGCC AATGAAGCCC TGGCACTATT GCTGGCACTG CTTCACAGCG CTGACGAAGG CCGTTTGCGT ACCGCACTGT CCACCGTCCT CGTGGGCCTT ACCGCAGAGA CAATCGCCAC ATTTGACCAT GACAGCGTTG CCTCCCGTCA CTGGCAGCGC CAGGCGTTGC ACTGGCGCGA ACGCTTACAC AGTGGCGGCC CCTTGGGGTT ACTGACCGAC CTATGCGCGC TACATGCCGC ACGCTTGCTC AGCCTCTTCG ACGGTGAGCG CCGTTTGAGC AACTACCTAC AACTGGGGGA ACTACTCCAG CAAGTCCACC TGCGCGCCCT GGGCTTACAT GGCTTGGTTG ATTGGTTGGC ACGGCGGATT GCTGAAGCCA AGAACGATGA CGAAACACAG CTATTGCGTT TGGAATCAGA TGCGCGCCGC GTGCAGATAG TCACCCTGCA TAAAAGCAAA GGCCTGGAAT ACCCACTGGT ATTCCTGCCT TACGTTGCGA TTGGCCGTTC CCATGCCGGC CCAGGCCGTT ATTGCGTCGT ACACGATGCG CAGCAAGGGC GCTGCCTGCA TTGGTGCCTT GATAAACAAG CACCAGAGTG GCAACGCGCT GAAACAGCGT GGAAACAGGA GCAGCGCGCT GAAGAAGCAC GCCTACTCTA CGTTGGCCTG ACCCGTGCCA AACATGCACT GTGGATCGCT ACCGGCACCT TCTATCAGAC GGAACACACC CCCTTATGGC CACTGCTGGG TGATCCCCAG GCAGTGCCGG CGCAGCCGGG CATCGTCTTT GACACAGCTG TACCACCGGC AATTTTGCCC CGTTTGACCC CAGAACAGCC GCACAGCGTC CCCCCCGCAC GGACCGCACA GCGTGCCCTG CTTTCGGATT GGTGGGTGTA CAGCTTTACC CAATTGGCGC ATGCCAAAGC GGAGCCTGCT CCTGATGGGG GTCGCCGTAT TGCCGAGCCA CTCACCGGAG GGCAGGACGA ACCAGCCTGG CCACAGGATG CCATCCAACA GCCCCTACCT GGGAGCGAAG TGCCCGCCGC CCCCCGTTTT ACCGGCATCC GTTTTGGTGT GGCACTGCAT GAAGTGTTCG AGCGTACCGA CTTCCTAGCC TGGAGCACTT GGCGTGCCAA TGTCCCTGTG CCTGCGACGG AACGTGGCGT GTTGCTTCAA GCCCTGCGTA GCAGCGGCTA CGTGGCTGAA GACGTGGAGG CCGGTGTCGC CTTGCTAACC CCATTGGTGG GCCATACCTT GACCAGTGTC CTTCCCGAGG GCGTGCGTTT GTGCGATGTG CCGACAACCG AGCGGCGACC GGAGATTGAA TTCCAATTTG TCATCCAGGC CACGGCGGTG GATGCCTTGC TTGCTTTGCT CCATGACCAC GGCTTGCTAC AGCAGCGTCA GAGCTTCGGC ATGCGGCGTC GCTTGGAAGG ACTGATGACC GGCATGATCG ACCTCATTTA TCGCCACGCC GGACGGTGGT ACGTCCTGGA TTACAAAAGC AATCGCCTGC CGGATTACAC GCCAGCGCAT CTTTCTGTGG CGATGACTGA CAGTGAATAT GACCTGCAGG CGCTGATCTA CACCGTGGCC CTGCATCGCT GGTTGCGTTT CCGTTTGCGT GATGCGTACG ACTACGCACG TGATATGGGA GGCATCCGTT ACCTGTTCTG CCGCGGTATG GACGCGACGC GTCCCGATGC AGCAGGCGTG TATACGCAAT CCTTTGCTCC TGCCTTGATT GAGGCAGTCG ATGCGATGTT CAGTGGAGCC TGCCCATGA
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Protein sequence | MNTPHDPYLT LPLHGVRLIE ASAGTGKTFT MATLVTRLVV ERGWRIGHIL AVTFTEAATQ ELRTRIRERL ILAARLVPQA AELPVPLPSA QPQMSHPTPH PQDAPRITPG VTNSASPEPP DVVLTLQILR THLAATDETP HALHSRLQQA ADEIDLAAIF TIHGFCTRVL REHALHTGQS FIPPTLLASD RDLLHELAAD IWRQEIADPE AIQDLIHLWP AGAPMLAQDL TDLLYQPHLS PAPSLAAPVV LPDAALAVAE TTLRHLWQTE GAALRSALHT ALEEGVLNKK SYKADALNDL WDWMERWSLA PNAYPEPHPK LQTLTVAALQ AGTNKQGAGR SPNSPVSEAV QHYLDALTSI ETARAQHRLR RLHRLRAAAR LRLTALKRQR RVQTYDDLIQ RVAQALDGPH RLALVRSLRQ QYRMALVDEF QDTDVAQWRI FHHVFGDTEH AHTADLTPAL FLIGDPKQAI YGFRGGDVHT YLAAAARAER APPLERNFRS RPLLLRAIEA LYTQAGDAAF LTPGIAFHPV QPGTHCRDTD LSNAGVPAPA LQVWQAPPPL DSTAKGKPKP WNADAARALC TDACVHAIHQ WLADAQTGRA LLDGRPVGAG DIAVLVRSHR EATLMQQALA RAGIPAVAAG KRSLLTTDEA NEALALLLAL LHSADEGRLR TALSTVLVGL TAETIATFDH DSVASRHWQR QALHWRERLH SGGPLGLLTD LCALHAARLL SLFDGERRLS NYLQLGELLQ QVHLRALGLH GLVDWLARRI AEAKNDDETQ LLRLESDARR VQIVTLHKSK GLEYPLVFLP YVAIGRSHAG PGRYCVVHDA QQGRCLHWCL DKQAPEWQRA ETAWKQEQRA EEARLLYVGL TRAKHALWIA TGTFYQTEHT PLWPLLGDPQ AVPAQPGIVF DTAVPPAILP RLTPEQPHSV PPARTAQRAL LSDWWVYSFT QLAHAKAEPA PDGGRRIAEP LTGGQDEPAW PQDAIQQPLP GSEVPAAPRF TGIRFGVALH EVFERTDFLA WSTWRANVPV PATERGVLLQ ALRSSGYVAE DVEAGVALLT PLVGHTLTSV LPEGVRLCDV PTTERRPEIE FQFVIQATAV DALLALLHDH GLLQQRQSFG MRRRLEGLMT GMIDLIYRHA GRWYVLDYKS NRLPDYTPAH LSVAMTDSEY DLQALIYTVA LHRWLRFRLR DAYDYARDMG GIRYLFCRGM DATRPDAAGV YTQSFAPALI EAVDAMFSGA CP
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