| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1806 |
|---|
| Symbol | |
|---|
| ID | 6121525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1871725 |
|---|
| End bp | 1872603 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641649775 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_001776327 |
|---|
| Protein GI | 170730894 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAGA ACCTCCTTTC ACCCAAACAA CTGAACAAAC ACCTAGAGCG CTTGCAACAA
AGCCTACCGA TGGCGCTGGT CAATCGTTTC ACCGAGATCG ACCTACTGAC TCAAGCCGCC
TCACTGTCCT TCTACGCACT GCTATCACTG GCACCGCTAC TGGTACTGCT CCTCTGGCTA
ACTGCCTCGC TCTATCCTGC GGCACAAGCA ACGCTGATCA CACAGATTGA ACAATTAGCG
GGTAACAGTG CAGCCACCGT CGCCAAAACG ATTTTACAAA ACGCCACCGC ACAACCCACT
TTCGGTACCC TGGCAGGACT GTGGAGCACA CTGTTATTGT TCATAGGTGC TACGGCAGTG
TTCGCACAAC TGCAAAACGC GCTGAACCTC ATCTTTCACA CCGATCAACG GCGCCTGGAA
GGAATAAAAG CATGGCTGAA AAAGCGTGTG TTTTCTTTCG GTGTCGTGTT AGCACTGGGC
TTCCTGCTGA TCATCTCCAT GGTCGCCACA ACCGCACTGC AAGTCGTGTT TACACACCTG
CCTTCCATGC TGCCGACGAT AGGCTACCTA AGCACACTGG TGCTGTACAC GCTAGCCTTT
GCGTTTTTAT ACCGCTATTT ACCAGACCGA ACAGTCAACT GGCGCCAAGC CTACATCGGC
GGCGCAATCA CCGCTTGCTT ATTCACACTG GGTCGCTATG CCATCGGGCT GTACATCAGC
ACCGCAGCAC CAGGCAGCGC CTACGGCTCA ATGGGTGCAT TGGTCATTAT GCTGGTATGG
ATGTACTACA CATCCGTCGT ATTCTTCATC GGCGCACTGC TAACTGCCGT CATCGACGAA
CGGTTACGTG ATCACAAGAT CCGAAACACC CAACACTGA
|
|---|
| Protein sequence | MAENLLSPKQ LNKHLERLQQ SLPMALVNRF TEIDLLTQAA SLSFYALLSL APLLVLLLWL
TASLYPAAQA TLITQIEQLA GNSAATVAKT ILQNATAQPT FGTLAGLWST LLLFIGATAV
FAQLQNALNL IFHTDQRRLE GIKAWLKKRV FSFGVVLALG FLLIISMVAT TALQVVFTHL
PSMLPTIGYL STLVLYTLAF AFLYRYLPDR TVNWRQAYIG GAITACLFTL GRYAIGLYIS
TAAPGSAYGS MGALVIMLVW MYYTSVVFFI GALLTAVIDE RLRDHKIRNT QH
|
|---|
| |