Gene Xfasm12_1801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1801 
Symbol 
ID6121039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1867418 
End bp1868752 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content50% 
IMG OID641649770 
Producthypothetical protein 
Protein accessionYP_001776322 
Protein GI170730889 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTACA TTGAAGGGTG CTGTGATTTT GGAGTGATGA TGTTCAATGC CACCATTGCG 
ATTACCTGGA CCCATTTGCA TGATGTCTTG GCACCTTATC CTTGGGTCTA CCGTGTATTA
GCAACAATCA TGTTGTTGTT GGCTGCTTGG TTTGCTAATT GGGTGACGAA GCGGGTTTTG
CTACGTGGTG TGCAGCGTGT GCTGCGTAGC AGTGTGCTTG CTGGTGAGGA GGGCGGCTAC
GGTATGCGTT TGGGTGTCAT CCCGCGCTTG GCTAATGTGG TTCCAGCATT GGTGTTGTCT
CTGGGAGTGG CCGCGGTGCC TGATGTGCCA CTGGTGGTGG TTGCAGTGGT GCGCAATGTT
TGTACGGCTT TTATCGTATT GACCGTGGCA TTGGCGTTGG CTCGTTTGAT GGATTTGGCG
AATCAAGTGT ATGAGCGCCG TCCCGATGCG CAGCACAAGC CAATCAAGAG TTATGTACAG
CTGCTGAAAA TTGTGCTCGG TTTGTTTACG GCTGTACTGA TGATTTCAGT ATTGATAGAC
AAGTCGCCGC TGATCCTTCT TTCTGGTCTG GGCGCCATGA TGGCTGTGTT GATTTTGGTC
TTTCAGGACA CGTTGTTGTC GTTGGTCGCC AGTGTGACGA TTAATTCCAA CGATATGGTG
CGGGTGGGTG ATTGGATCGA CATGCCACAG CAGGGCGCTG ATGGGGATGT GATTGATATT
GCGCTGCATA CGATCAAGGT CCAGAACTGG GACAAAACGA TTACTGCAAT TCCAATCAAG
CGATTGATCA CTGATTCGTT CAAGAACTGG CGTGGAATGC ATGAGAGTGG TGGGCGCCGG
ATCAAGCGGT CGCTGTTTCT GGATCAGTGC AGTGTACGTT TTCTTGATGA TTCTGAAATT
GCAAGGATGC GTGAGTTCAG CATATTGCGT GATTACATTG ATGCAAAGTG CGAGAGTTTG
GCTGAGTGGA ATGTGGCGCT GTCAAGTCAA GGTGTTGCTT CAGTCAATGC TCGCCGTATT
ACCAATCTTG GGACATTTCG CGCTTATGTG GAGCATTATC TGCGTGCCAG CCCGCATGTG
CACCAGGAGA TGACGTTGTT AGTACGGCAA TTGCAACCAA CGGATCTTGG GCTGCCTTTG
GAGATCTACT GTTTTACAAA TAACACGGAT TGGGTGGCTT ACGAGCAAAT TCAATCGGAC
ATTTTCGATC ATCTGTTGGC GTTGTTGCCG CAGTTTGGGT TGAGGGTTTT TCAGAGTTCC
AGTGACACCA TGTTGATGGA AACGGCGCAA CGTTTGAGTG CTATATCGGC TGCGTTAACG
GGGCGTGCGC ATTGA
 
Protein sequence
MPYIEGCCDF GVMMFNATIA ITWTHLHDVL APYPWVYRVL ATIMLLLAAW FANWVTKRVL 
LRGVQRVLRS SVLAGEEGGY GMRLGVIPRL ANVVPALVLS LGVAAVPDVP LVVVAVVRNV
CTAFIVLTVA LALARLMDLA NQVYERRPDA QHKPIKSYVQ LLKIVLGLFT AVLMISVLID
KSPLILLSGL GAMMAVLILV FQDTLLSLVA SVTINSNDMV RVGDWIDMPQ QGADGDVIDI
ALHTIKVQNW DKTITAIPIK RLITDSFKNW RGMHESGGRR IKRSLFLDQC SVRFLDDSEI
ARMREFSILR DYIDAKCESL AEWNVALSSQ GVASVNARRI TNLGTFRAYV EHYLRASPHV
HQEMTLLVRQ LQPTDLGLPL EIYCFTNNTD WVAYEQIQSD IFDHLLALLP QFGLRVFQSS
SDTMLMETAQ RLSAISAALT GRAH