Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1800 |
Symbol | |
ID | 6121038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1864712 |
End bp | 1866931 |
Gene Length | 2220 bp |
Protein Length | 739 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641649769 |
Product | beta-glucosidase |
Protein accession | YP_001776321 |
Protein GI | 170730888 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAATTC CACCGCTAAA TAAACGTTTT ATCAAGGATT TCATGACTGC TTCTGATCGC ATTGAATCCC TGCTTTCCTG TATGACGGTA GAGGAAAAGG TGGGGCAGTT GGGTGTTTTT GCTGACATGG TGCGGCCATT TGCTCCAGAC GTGAATCCTG AGGCTAATGT GCGTAACGCT GATGAGCTGT TGGCTCAGGT GCGTGCTGGT CGAGTTGGTT CGTTGTTCAA TGGTGTTGGG GTTGAACTGG GACTTAGGAT CCAACAGGCA GCGGTAGAGG AGAGTCGTCT CGGAATTCCA GTCATTTTGG CTGCAGATGT GATTCATGGG ATGCGTACTG TGTTCCCAAT TCCGTTGGGT GAAGCGGCCA GTTTCGAGCC AGAGCTTGCC GAACGTACTG CGCGTGCGAC TGCGATTGAG GCTACTGCGG CGGGTATTCA TTGGACTTAC GCACCGGCAG TGGATATTGC TCGTGACCAG CGCTGGGGCC GTGTTGCTGA GGGGGCTGGT GAGGATACGC TGCTGGGGTC TGCATTTGCC GCAGCCCGTG TGCGTGGTTT TCAGGGGCCT GACTTGAAGG CACCCGATGC ATTGATGGCA ACACCAAAAC ACTTTGCTGC TTACGGTGCG GTTGCTGCCG GGATGGAGTA TGCGAATGTG GAGATTGCGT TGCAGACGCT GCGTGATGTG CATTTACCAC CGTTCCAAGC AGGGTTTGCT GCTGGTGCGC TGACGGTGAT GACGGCGTTC AATGACATTA ATGGTGTGCC GGCCAGCGCG AATCGTGAGT TGTTGACCGA TATTCTGCGT GGTGAGTGGT GTTTCCCTGG TTTGGTGATT TCCGATTACA CCGCTGATAT GGAGTTGATC GCACATGGCT ATGCTGCTGA TGCGCGTGAT GCGACAAAGA AAGCGTTCTT GGCTGGGTTG GATTTGAGTA TGCAGAGCGG CTTTTATGCC GAGCATTTGC CTGAGTTAGT GGCGAGCGGT GAGGTGCCGA TGGCAATGCT TGATACGAGT GTGCGGCGTA TGTTGCAGAT CAAGGAAGTC ATTGGTTTAT TCGACAACCC GTACCGGTCT TTGGATCTGG TCCGTGAGGC CGATGTTTCG TACATTTCGG CGCATGATGC GTTGTCGCGT GATGCGGCGC GGCGTTCAAT CGTATTACTG AAAAACGATG GGCCGTTATT GCCGTTGCGT AAGCAGGCAC AGCGTATCGC GCTGATTGGT CCGTTTGTGC AGGATCGTGA CAACATTGAG GGATGTTGGA CCCTATTCGG CGATAAGCAC CGTTATGTGA CTTTGGAACA GGGGGTGCGC GCAGTGGTCG ATACGCAGAT GCTAACGGTG GTTCCTGGTT GCAATATTGA GGAGCCAATT TCTGGTGGTG TTTCCGATGC GGTGCAAGCA GCACAGGCGG CTGACGTGGT GGTGTTGGCA TTGGGCGAGC CGCAGCGTTA CAGTGGTGAA GCGCAGTCGC GTACCGACAT CGTGTTGCCT GAGGTGCAGC AGGTGTTGGC TGAGGCAGTC GCTGCGATGG GTAAGCCAAT CGTGGTGTTG TTACGTAACG GTCGCGCGTT GGCACTCAGG GGCGCGGTAC GTGATGCGCA GGCGATCTTG GTTACTTGGT TTCTTGGGAC GCAGACTGGT ACGGCTGTCA CTGATGTGTT GTTTGGTGAC TATAATCCGT CCGGGCGTTT GCCGGTGAGT TTCCCTTACA CGACGGGACA GCAGCCGTAT TTTTATAATC ATTCACGGAC TGGGCGTCCT GAGTTACCGA CGATATCTGA GTTCAAGGCA CGTTGGCGTG AGGTTCCGAA TGCGCCACTA TATTCGTTCG GTCATGGCTT AAGTTATACC CGTTTCGCCT ATTCTGCACC GCAATTAAGC ACGGTATCTC TGGCGTGGGA TCAGACGTTG TTGGTGACGA CCCGAGTGAC TAACATCGGG ATGGTTGCTG GTGAGGAGGT GGTGCAGTTG TATGTGCATG ATCGTGTTGC CAGTCGCGTG CGACCGATAC GTGAGCTGAA GGCTTTTCGT AAGGTATACA TTGCACCAGG TGAAAGTGTG GAGGTGTGTT TTACTCTCGA CCGTAATGCG TTGGCTTTTA CCAATCCGCA AGGTGTGTAT GGTGCCGAGC CTGGTTTATT TGATCTATGG GTGTGTGCAA ACGCGCAAAG TGGTGAGGCG ATGCAGTTTG AATTACTTGC AGCTACCTAA
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Protein sequence | MGIPPLNKRF IKDFMTASDR IESLLSCMTV EEKVGQLGVF ADMVRPFAPD VNPEANVRNA DELLAQVRAG RVGSLFNGVG VELGLRIQQA AVEESRLGIP VILAADVIHG MRTVFPIPLG EAASFEPELA ERTARATAIE ATAAGIHWTY APAVDIARDQ RWGRVAEGAG EDTLLGSAFA AARVRGFQGP DLKAPDALMA TPKHFAAYGA VAAGMEYANV EIALQTLRDV HLPPFQAGFA AGALTVMTAF NDINGVPASA NRELLTDILR GEWCFPGLVI SDYTADMELI AHGYAADARD ATKKAFLAGL DLSMQSGFYA EHLPELVASG EVPMAMLDTS VRRMLQIKEV IGLFDNPYRS LDLVREADVS YISAHDALSR DAARRSIVLL KNDGPLLPLR KQAQRIALIG PFVQDRDNIE GCWTLFGDKH RYVTLEQGVR AVVDTQMLTV VPGCNIEEPI SGGVSDAVQA AQAADVVVLA LGEPQRYSGE AQSRTDIVLP EVQQVLAEAV AAMGKPIVVL LRNGRALALR GAVRDAQAIL VTWFLGTQTG TAVTDVLFGD YNPSGRLPVS FPYTTGQQPY FYNHSRTGRP ELPTISEFKA RWREVPNAPL YSFGHGLSYT RFAYSAPQLS TVSLAWDQTL LVTTRVTNIG MVAGEEVVQL YVHDRVASRV RPIRELKAFR KVYIAPGESV EVCFTLDRNA LAFTNPQGVY GAEPGLFDLW VCANAQSGEA MQFELLAAT
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