Gene Xfasm12_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasm12_1780 
Symbol 
ID6121018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M12 
KingdomBacteria 
Replicon accessionNC_010513 
Strand
Start bp1847245 
End bp1848465 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content50% 
IMG OID641649751 
Producthypothetical protein 
Protein accessionYP_001776303 
Protein GI170730870 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGGT TTGCGGTGAT TCCCAGTGTG ACAACAACGA CAACTAGTGG TGAGCCCATC 
GCTAGCGATG TTGCCCGTAA ACAGAATCTG CTGGAACTTG ACCGTGAGGG GTTGGAGCGC
TTTTTCGAAG ATGTTCTTGG TGAGAAACGC TATCGTGCCC ATCAGGTCAT GAAATGGATC
CACCACCGTT ATGTCGCTGA TTTCGAGCAA ATGACCGATG TTGGCAAAGC GTTGCGTACT
AGGTTGCAGG CTTGCGCTGA GGTCAGGGTC CCCCGTGTTG TCTTCGACAA GCACTCAGCC
GATGGCACAC ACAAGTGGTT GCTGGCGATG GGCACTGATA GAAAAAATGC GATTGAGACT
GTTTATATCC CGGACAAAGG GCGTGGTACG TTGTGTGTGT CTTCGCAAAT AGGGTGTGGA
TTGAACTGTA CGTTTTGTTC GACAGCCACC CAAGGTTTTA ACCGCAATCT GACCACGGCC
GAGATTATCG GCCAGGTTTG GGTTGCTGCC CGTCACCTTG GTAATGTGCC GCACCAGCGT
CGTCGTCTTA CGAATGTGGT AATGATGGGT ATGGGTGAGC CCTTAATGAA TTTCGATAAC
GTTGTGCGTG CGATGAGCGT GATGCGCGAT GATTTGGGCT ACGGGTTGTC CAACAAGCGT
GTGACTTTAT CGACTTCCGG TTTAGTTCCG ATGATTGATC GCCTCTCGAC TGAGAGTGAT
GTGTCTTTGG CTGTATCACT GCATGCGCCG AATGACAAAC TGCGCGAACA ACTGGTTCCG
TTGAATAAGA AATATCCAAT TGTTGAGCTG ATGGCATCCT GCGAGCGTTA TTTGTCTGTT
AATCGTAAAC GTGATTCTGT CACTTTTGAA TACACTTTGA TGAAGGGTGT TAATGACAAG
CAAGAACATG CGCATGAGTT GGCCAAACTA ATGCGGCAAT TTGACTGTGC GATGCAGGTG
AAGGGTGCAG CGAAGGTTAA CCTGATTCCA TTCAACCCGT TTCCGGGCAC CTGTTATGAA
CGTTCTACGG AAGTTGATAT CCGTGCTTTC CAGAAGATCC TGTTGGACGC ACAAATTTTG
GCCATGGTGC GTCGTACTCG TGGAGACGAC ATTGATGCAG CGTGCGGGCA ATTGAAAGGG
CAAGTCGTGG ATCGTACTCG CCGCCAAGCT GAGTTCCGCC GCACTATTGA AGATCGGGTT
GGTCGAGATG TTGCAGCGTG A
 
Protein sequence
MNGFAVIPSV TTTTTSGEPI ASDVARKQNL LELDREGLER FFEDVLGEKR YRAHQVMKWI 
HHRYVADFEQ MTDVGKALRT RLQACAEVRV PRVVFDKHSA DGTHKWLLAM GTDRKNAIET
VYIPDKGRGT LCVSSQIGCG LNCTFCSTAT QGFNRNLTTA EIIGQVWVAA RHLGNVPHQR
RRLTNVVMMG MGEPLMNFDN VVRAMSVMRD DLGYGLSNKR VTLSTSGLVP MIDRLSTESD
VSLAVSLHAP NDKLREQLVP LNKKYPIVEL MASCERYLSV NRKRDSVTFE YTLMKGVNDK
QEHAHELAKL MRQFDCAMQV KGAAKVNLIP FNPFPGTCYE RSTEVDIRAF QKILLDAQIL
AMVRRTRGDD IDAACGQLKG QVVDRTRRQA EFRRTIEDRV GRDVAA