| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1779 |
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| Symbol | |
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| ID | 6121017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 1846449 |
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| End bp | 1847258 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641649750 |
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| Product | type IV pilus assembly protein PilF |
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| Protein accession | YP_001776302 |
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| Protein GI | 170730869 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.821646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGCAGC GTGATATATC CCTGGCTTTA GCGTTTTCTT CTTTGCTGAT TTTATCTGGC
TGCTTAGTCA TGTCTGATAA GAGGGAGACA CGTATTAAGT CAGTTCAGAA TCTCGCTCCT
GTTTACAACG TGCGTGATGA TGCCAAAACA CGCCGTCGTG TTGCGTTGAC TCAGACGCTT
GGGCGCGCCT ATAACCAATT CAATGCGGGT GATGATGTAG CTGCCGAGAA GTTGCTAGAA
GAAGTATTGC GCCAGGATAC ATCTTCAATT GATGCCTGGA CACTGCGGGC CACGATCTAT
AGTAAGCGTG GCGATGTGGT GCATTCCGGT GAGTACTACC GTAAGGCTGC CCAGTTGGCG
CCACAGCGTG GTGATGTACT CAATAATTAC GGTGCTTGGT TGTGTGCAAA TGGGTATCCA
GCCGAGGCAT TGGTTTGGTT CGAACGTGCG ATGGCTGATC CGGCCTATGG CGAGCAGCCG
GGAACTTTAG CCAATTCCGG CGGTTGTGCC CTTCAAGCTG GACAGCGTGA TCGTGCCGAT
CACGATTTGC GTAGGGCGCT GGAGTTGGAT CCAAGCAATG CTTACGCATT GGAATCAATG
GCGCGAAACG AATACGACAA GCATCGTTAT TTTGAAGCGC GTGCCTTCAG CGAGCGTCGT
TTGGCAACAA CTGTGCCTGC GACGGCTTCT GTATTGAAAC TCGCGATTCA AATCGAGCAA
GAGCTAGGAG ACAGGGCAGC TGCTAGCCGA TATCAACAGC GGTTAGTCAA GGAGTTTCCC
GAGACTGTAG CCGTCGAACC CAGGGGCTAA
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| Protein sequence | MLQRDISLAL AFSSLLILSG CLVMSDKRET RIKSVQNLAP VYNVRDDAKT RRRVALTQTL
GRAYNQFNAG DDVAAEKLLE EVLRQDTSSI DAWTLRATIY SKRGDVVHSG EYYRKAAQLA
PQRGDVLNNY GAWLCANGYP AEALVWFERA MADPAYGEQP GTLANSGGCA LQAGQRDRAD
HDLRRALELD PSNAYALESM ARNEYDKHRY FEARAFSERR LATTVPATAS VLKLAIQIEQ
ELGDRAAASR YQQRLVKEFP ETVAVEPRG
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