Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_1771 |
Symbol | |
ID | 6121009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | - |
Start bp | 1838198 |
End bp | 1839766 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641649743 |
Product | hypothetical protein |
Protein accession | YP_001776295 |
Protein GI | 170730862 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACGTT GTTGGACTCT TATCGTTGGT GCCACGCTTT GCATAGCGTG TCTTTCTGTT TCAGTTGCAT TGACTGATGA CTACGTTTGG GTGACGACGC AGCGTCACGA ACAACAGCGC CTGCGCGACT TGGCGCAGCA AATGGGTCAG CGGGTGGATC GCGCCGTTTC CGAATCATTG CTGCTCCTGT CAGACATGGA TCATGCGCAC TTGGCCCCGT GTTCTCCAGA ACACATCGTA CGGATGCGTG CATTGGTGCT GGCTACCCGC TACATCACAG AACTTGACTA TGCCCCGACA CAGAAACTGA GCTGTACATC GTGGGGACCG TTTGATGGTG CACTCAAGCA GACGTTGGCC AGCGATGCCA GAAACGATGG CCTTGAATTG GTGAAGCGGG TGTCTTTACC GCTGAACTCT GAGCAGCGCC TGCTGGGCTT GCATCATGGT GACTACCATG CACTGATGAA GCTCAGCACC TTTATGGATT TTCCAATTCC ACCCGGTGTG GAATTGGCAC TGGCCACTAT GGATGGGGTG CTGTTGCTGA GCACTGGTTC TCATGTGAAA GAACTGTTTG GTAACCCTGT GAATCAACCA GCGAGTGATC CTTCGCATGA TGTGGTCGCA GCCCGCATTC AAAACCCTCA TCATGATTGG CAGATCGCTG TCATTGAACC AATCCAACAG CTTGTGGGTG CGGTACATCG CAAAGAGTGG CTGGCCATCC CGGTTGCCTT ATTGGTTTCA TTGAGTGTCA GCGGCTTAGC CATCCTGTAT TTGCGCCGGC GGCGCGCTCC GTTGGCCCGG TTGCGTCAGG CGATCCAGCG ATGTGAATTC TTTGTCTGCT ATCAGCCGAT TGTTTCACTG AGTGATGGGC GTTGCGTCGG TGCAGAAGCA TTGGTGCGTT GGCGCCAGCA AGACGGTACA TTGATCTTGC CGGACCAATT CATTCCACTG GCCGAGCGGA GTGGTTTAAT TCTTCCCATT ACCGATCAAG TCATCGCAGC GTCCATGCGT GAATTAGGAC CATTACTGGT GGCTGATCGT TCGTTGCACA TTGCGATTAA TGTTTCAGTG AAGGACATTG AATCAGGACG CGTACTGGAT GTATTGGCGC TTGCTTTACA AGACACTGGC GTATACAGAA AACAACTGTG GATCGAGGCG ACTGAGCGCA GTTTCATGGA TGCACGTGCC GCACGCGAGC ATATCGTGCG GCTACGAGAG GCTGGATATG CTGTAGTGAT TGATGATTTT GGGACTGGTT ATTCAAATTT GCAGTATTTG CAGCAACTGC CATTAGACGC TTTGAAGATT GATAAATCCT TCATTGATAC GGTTGGTCGC GATGTCACTA ACACAGCGGT TGCTTCGCAC ATCATCGACA TTGCTAAGGA ATTGGGCATG CGTACCATCG CTGAAGGTGT GGAGCGTGAG GAACAACTCG TCTATCTACG TGCCCGTGGT GTGGATATGG TTCAAGGCTG GTTATTCTCA TCTCCGTTAA GCGCCGCTGA GTTCGTTGAC TATCTTTCCC ACAATCGCAG TATGCATCCC GATGACTGA
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Protein sequence | MKRCWTLIVG ATLCIACLSV SVALTDDYVW VTTQRHEQQR LRDLAQQMGQ RVDRAVSESL LLLSDMDHAH LAPCSPEHIV RMRALVLATR YITELDYAPT QKLSCTSWGP FDGALKQTLA SDARNDGLEL VKRVSLPLNS EQRLLGLHHG DYHALMKLST FMDFPIPPGV ELALATMDGV LLLSTGSHVK ELFGNPVNQP ASDPSHDVVA ARIQNPHHDW QIAVIEPIQQ LVGAVHRKEW LAIPVALLVS LSVSGLAILY LRRRRAPLAR LRQAIQRCEF FVCYQPIVSL SDGRCVGAEA LVRWRQQDGT LILPDQFIPL AERSGLILPI TDQVIAASMR ELGPLLVADR SLHIAINVSV KDIESGRVLD VLALALQDTG VYRKQLWIEA TERSFMDARA AREHIVRLRE AGYAVVIDDF GTGYSNLQYL QQLPLDALKI DKSFIDTVGR DVTNTAVASH IIDIAKELGM RTIAEGVERE EQLVYLRARG VDMVQGWLFS SPLSAAEFVD YLSHNRSMHP DD
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