| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1752 |
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| Symbol | |
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| ID | 6120989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | + |
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| Start bp | 1816067 |
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| End bp | 1819192 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641649727 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001776280 |
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| Protein GI | 170730847 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0957088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAT TCAGTAGATA CACGCCAGCG TTGAATCATT TAGCGCTGGC GCTAGCGTCA
ACATTGCTCC TGATCGCGAC CTATACAGCC AACGCAACGG CAGCCGAATC CGAGCACAGC
ACGAACGAAG ACAGCAAGGC TGCACCACAC GATAGCAAAA CCACCGAACT GGACCGCGTT
GTGATTACCG GATCACGCAT CCCACGCGCT GGGTTCGACA CGTTAGAACC GGCCACGGTC
GTCAACCGAC AATACATTGA CAGTTTCGGC TTCACCAATG TTGCCGATGC ACTATTTTCA
CAACCTGGCT TCAACAGCAG CGCCAGTGTA CGCGGCAATC AGGCAGGTTT TGGTGCCGGT
GTCAGCTTCC TCGGCCGCTT CGGGCTTGGT TCCAACCGTC AGCTCACCCT GGTCAACGGA
CGCCGTTTAG TCACCTCTAA TCCCCCCACC GTCTTTGGCC CTGGCGACGG TGGTACCCAG
GTCGATCTGA ATGTGATCCC GACCTCATTG ATCGAACGCA CCGAAACCAT CGGCGTCGGT
GGCGCACCCA CGTATGGCTC AGATGCCATC TCCGGGGTCA CCAACATCAT TCTGAAGAAA
AACTACGAAG GTGCAGAAGT CAACATTGGC TATGGACTGA CCGAACGCGG CGACAACGCG
CGCTACAGCT ACTCAGCACT GCTAGGCAGC AACTTTGCCA ATAGCCGGGG CAACGTGACC
ATTGCTCTGG ACGCGGACGA TAGCGCAGGC GTACTCGGTG AGGCACGCCG CTACTACCGC
AACGGCTACT CAATGCAAAC CAATCCAAAT GCTGCAGCGA TCGCGCAGTT TCAGCCTGGA
CGCCAATACG CGACCGACGG ACGGGTGAAC CCCACTATCC CGTTCAACAC CAGTAACACG
GACGGCATCC CTGGCAGAGT GCTCATCCGC AACCGCCGTA TTAACAACAT GACCTGGGGC
GGTCTGCTTT ACCCAAGCAC CGGCCGTTAC ATCCGTGACG CCAGCCAACA ACCACGCGGT
TTTGGCCCAA ATCAAGATCA ATTCCTGCAA TTCGACAAAC ACGGCAACCT GGTCTCCTAC
AACCCTGGGG TTAACTTCGG CAATAGCTCC TCCTCTGGCG GCGATGGGCT GGACCTCAAT
CAAACAACAC AAGTCACCTC ACAGTTGGAC CGCAAATCGG TGTTCATGCT CGGCAACTAC
GACGTCACCG ATAACATCAG CAGCTTCTTT GAGGGGTCCT ACTACACCTC AAAAGCACTC
GAGCTGACCG ATCAGAGCAT TTACAACGCA GCCAGTTTCG GAACCGGCAA TGTCAACGGT
AGCGGCGATC AAAGCGGAGC GCTGAACTTT AACATCGACA ATCCGTTTCT CTCCGAGCAA
AACCGGCAAG CCCTGCGCAA CCTAGGGATC ACCGATTTCC GGCTGTCGCG CGCCTCACGC
GATCTGGTCA TCGGCAACTC CAGCACCGAT ACCCGGCTAT GGCGTGCCGT CGCTGGCCTT
AACGGCCACT TCGATGCAGG CGGACACCCA TTCACCTGGG AAACCAGCCT CAATCATGGC
GAAGGCAACT TCGACTATTA CAGAACCGGT CTGATCCAAC AACACTTCAT CAACGCCATT
AACGTAACGC GTAACAGTGC TGGTGAGATT GTTTGCGATT CGAGTGCAGC AGGGACCACC
GTGGACCCGA ACTGCGTGCC ACTCAACCTC TTTGGCGAGG GCGTCGCCTC AGCGGCAGCA
CGTAATTACG TCACGACACC CACACATGCC AAAGCACAGA TGAAGCAAAC CGTATTCAAT
GCGAACCTGT CCGGCAGTTT CATCGACTTA CCGGGTGGCA AACTCGGCTT CAACGTTGGC
TACGAACGCC GTAGGGAAGA AGGCCGCTTC ACCCCGGACG AGTATCAGCG TCTGGGTTTG
GGCCGGACAG TACCGACCAC CGGCTCACAC GGGACATTCA CCACGAATGA GTACTTCGGC
GAGATCTTGG CGCCGCTAGT CAATCCGGAC GCTCACCTCC CTGGCCTGCA TCGCCTTGAT
CTGACCGCCA AACTCCGCCG CGTCAACAAC ACCGTCAACG GGTGGTTCAC TGCCTACACC
TACGGCATCC AATACGAACC GTTCCAAGGT CTCCAACTCC GCGGGAATAA GACCCACTCC
TTCCGCGCGC CCGCCATTGT TGAGTTGTAC ACCAGCCAAC AACCCAGGTA CTACTCCATC
CCCGAGCCTT GCACCCCAGC CAATATCACT GCAGGGAATC GCCCGGAACT GCGTCAGCGC
AACTGTGAAG CGTTCTTCGC ATACTACAAC GGTGTGAATC CTGGCACTTT CCAGGAGGCC
CCAACCACTC AGCTTGGTTC CGTGAGCGGC AATCCCACAC TGGAAAACGA ACTCGCCAAA
TCTTGGACAG CCGGGATCGT CTTCCAACCA GAGTGGGCAC ACGGCTTGCG CGTGGCGGCA
GACTGGTACA ACATCAAGAT CAGCAATGTG ATCACCCAGT TAGATTCCGG AGATATCACT
TCAGGGTGCT TTGACAACGA AACATTCAAC CGCAACGACG TACCAAACGC CAACCGCTTC
TGCAGCATGA TCACCCGTGA TCCAAGCACC GGCGTGGCCA GCAGTGTCCG GGGAGAATAT
ACCAATGGCC CGTACATCAA CTTCCGTGGC TGGACCGCAG AGATCAACTA CCGTTTCGAT
CTGAAAGAAC TGCGCTGGGG CGGGAGCGGA ATCTTGGACC TCGGCTTCTA TGGCTATTTC
CCGAAGAACC TGAAGTACAC AGCCGCTCAA GATATCCCAG CTGAAGAATC CGTCGGAACC
ATCGATAATT CCAAACGTCA ATTCCAATGG AACGCCCGCT ATCTGACCGG CCCCTGGAAT
TTTGGCGTCA GCGCAAATTA CAAAAGCGCT GCGCTGTACA GTCTGACCAA TACAGTAGAG
ACACGTGACT ACCTGGGCAT CCCAAGCTAC ACCAGTTACG ACGCCAATAT CGGCTACACA
TTTGACAAGC ACAGCAGCCT CAACCTGGCA ATCCTGAACG CGACTGACAA GATGGTGGCA
TTCCCATACG TATACGACGG GCTGGGACGC CGCTACATGC TGACATTCAA CTACAAATTC
CATTAA
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| Protein sequence | MKTFSRYTPA LNHLALALAS TLLLIATYTA NATAAESEHS TNEDSKAAPH DSKTTELDRV
VITGSRIPRA GFDTLEPATV VNRQYIDSFG FTNVADALFS QPGFNSSASV RGNQAGFGAG
VSFLGRFGLG SNRQLTLVNG RRLVTSNPPT VFGPGDGGTQ VDLNVIPTSL IERTETIGVG
GAPTYGSDAI SGVTNIILKK NYEGAEVNIG YGLTERGDNA RYSYSALLGS NFANSRGNVT
IALDADDSAG VLGEARRYYR NGYSMQTNPN AAAIAQFQPG RQYATDGRVN PTIPFNTSNT
DGIPGRVLIR NRRINNMTWG GLLYPSTGRY IRDASQQPRG FGPNQDQFLQ FDKHGNLVSY
NPGVNFGNSS SSGGDGLDLN QTTQVTSQLD RKSVFMLGNY DVTDNISSFF EGSYYTSKAL
ELTDQSIYNA ASFGTGNVNG SGDQSGALNF NIDNPFLSEQ NRQALRNLGI TDFRLSRASR
DLVIGNSSTD TRLWRAVAGL NGHFDAGGHP FTWETSLNHG EGNFDYYRTG LIQQHFINAI
NVTRNSAGEI VCDSSAAGTT VDPNCVPLNL FGEGVASAAA RNYVTTPTHA KAQMKQTVFN
ANLSGSFIDL PGGKLGFNVG YERRREEGRF TPDEYQRLGL GRTVPTTGSH GTFTTNEYFG
EILAPLVNPD AHLPGLHRLD LTAKLRRVNN TVNGWFTAYT YGIQYEPFQG LQLRGNKTHS
FRAPAIVELY TSQQPRYYSI PEPCTPANIT AGNRPELRQR NCEAFFAYYN GVNPGTFQEA
PTTQLGSVSG NPTLENELAK SWTAGIVFQP EWAHGLRVAA DWYNIKISNV ITQLDSGDIT
SGCFDNETFN RNDVPNANRF CSMITRDPST GVASSVRGEY TNGPYINFRG WTAEINYRFD
LKELRWGGSG ILDLGFYGYF PKNLKYTAAQ DIPAEESVGT IDNSKRQFQW NARYLTGPWN
FGVSANYKSA ALYSLTNTVE TRDYLGIPSY TSYDANIGYT FDKHSSLNLA ILNATDKMVA
FPYVYDGLGR RYMLTFNYKF H
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